RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ESAMQ96AP7 390 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 HHIPQ96QV1 700 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 EGFL8Q99944 293 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 NOL11Q9H8H0 719 aaKnown RBP17.42■□□□□ 0.38
SNX1-208ENST00000559844 SPATA6Q9NWH7 488 aaPredicted RBP17.42■□□□□ 0.38
SNX1-208ENST00000559844 FAM86C2PA6NEL3 165 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 C1QTNF3-AMACRE9PGA6 284 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 KPNA5O15131 536 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 CFLARO15519 480 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 OR4F21O95013 312 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 MATN4O95460 622 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 ME2P23368 584 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 PRDX3P30048 256 aaKnown RBP17.42■□□□□ 0.38
SNX1-208ENST00000559844 METAP1P53582 386 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 B4GALNT1Q00973 533 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 LRP8Q14114 963 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 RPS6KA2Q15349 733 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 TAF11Q15544 211 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 CST6Q15828 149 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 ZNF423Q2M1K9 1284 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 CMPK2Q5EBM0 449 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 LRRC73Q5JTD7 316 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 TTC23LQ6PF05 361 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 DPPA4Q7L190 304 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 FBXL6Q8N531 539 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 TMEM105Q8N8V8 129 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 SLC26A7Q8TE54 656 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 MRGPRX1Q96LB2 322 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 PCDH12Q9NPG4 1184 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 ZNF225Q9UK10 706 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 ADAMTS6Q9UKP5 1117 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 PTGDR2Q9Y5Y4 395 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 MRASO14807 208 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 NVLO15381 856 aaKnown RBP17.41■□□□□ 0.38
SNX1-208ENST00000559844 NRP2O60462 931 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 AP2A2O94973 939 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 ENO2P09104 434 aaPredicted RBP17.41■□□□□ 0.38
SNX1-208ENST00000559844 ATP1B2P14415 290 aaPredicted RBP17.41■□□□□ 0.38
SNX1-208ENST00000559844 GABRG2P18507 467 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 NDUFV2P19404 249 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 CXCL12P48061 93 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 CCR3P51677 355 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 PSME3P61289 254 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 RPS14P62263 151 aaKnown RBP17.41■□□□□ 0.38
SNX1-208ENST00000559844 GRB7Q14451 532 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 MUM1Q2TAK8 710 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 ANO7Q6IWH7 933 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 PAOXQ6QHF9 649 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 BMP8AQ7Z5Y6 402 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 TRAM1L1Q8N609 369 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 EFCAB3Q8N7B9 438 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 PCYOX1LQ8NBM8 494 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 NAT14Q8WUY8 206 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 ATP6V1E2Q96A05 226 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 WWOXQ9NZC7 414 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 CD84Q9UIB8 345 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 ASB1Q9Y576 335 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 ANGPTL3Q9Y5C1 460 aa17.41■□□□□ 0.38
SNX1-208ENST00000559844 QSOX1O00391 747 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 FBP2O00757 339 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 SORBS2O94875 1100 aaKnown RBP17.4■□□□□ 0.38
SNX1-208ENST00000559844 GUCA1CO95843 209 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 MPC1LP0DKB6 136 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 AKT1P31749 480 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 ERVPABLB-1P60509 514 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 FAM46CQ5VWP2 391 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 ERAP2Q6P179 960 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 KIAA1324Q6UXG2 1013 aaKnown RBP17.4■□□□□ 0.38
SNX1-208ENST00000559844 HSD11B1LQ7Z5J1 315 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 PGBD3Q8N328 593 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 CDYL2Q8N8U2 506 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 ROPN1LQ96C74 230 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 SIPA1Q96FS4 1042 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 ZSCAN5AQ9BUG6 496 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 CD244Q9BZW8 370 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 SDR39U1Q9NRG7 319 aaPredicted RBP17.4■□□□□ 0.38
SNX1-208ENST00000559844 TMEM45AQ9NWC5 275 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 MCM8Q9UJA3 840 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 NDUFAF1Q9Y375 327 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 PLXNB3Q9ULL4 1909 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 C16orf96A6NNT2 1141 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 TRIM38O00635 465 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 MID1O15344 667 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 TAPBPO15533 448 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 ADH1BP00325 375 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 DNTTP04053 509 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 C8GP07360 202 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 AOAHP28039 575 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 CCR7P32248 378 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 ARL1P40616 181 aaPredicted RBP17.4■□□□□ 0.38
SNX1-208ENST00000559844 PIK3CGP48736 1102 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 GTF2A1P52655 376 aaPredicted RBP17.4■□□□□ 0.38
SNX1-208ENST00000559844 THOP1P52888 689 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 GBX1Q14549 363 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 ZNF284Q2VY69 593 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 PLEKHS1Q5SXH7 462 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 FAM219BQ5XKK7 198 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 RAVER1Q8IY67 606 aaKnown RBP17.4■□□□□ 0.38
SNX1-208ENST00000559844 OR52B6Q8NGF0 335 aa17.4■□□□□ 0.38
SNX1-208ENST00000559844 TSPEARQ8WU66 669 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms