RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 KCNC1P48547 511 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 SLC18A1P54219 525 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 WDR4P57081 412 aaKnown RBP10.18□□□□□ -0.78
TPM1-221ENST00000559831 KRT33BQ14525 404 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 CLCA4Q14CN2 919 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 PCLAFQ15004 111 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 ELOCQ15369 112 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 PHKG1Q16816 387 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 UAP1L1Q3KQV9 507 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 DUS1LQ6P1R4 473 aaKnown RBP10.18□□□□□ -0.78
TPM1-221ENST00000559831 UNC5DQ6UXZ4 953 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 ZYG11AQ6WRX3 759 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 MBOAT1Q6ZNC8 495 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 MTERF4Q7Z6M4 381 aaKnown RBP10.18□□□□□ -0.78
TPM1-221ENST00000559831 GKN2Q86XP6 184 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 TMEM151AQ8N4L1 468 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 PHC3Q8NDX5 983 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 ZNF548Q8NEK5 533 aaPredicted RBP10.18□□□□□ -0.78
TPM1-221ENST00000559831 FAM46DQ8NEK8 389 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 PRSS33Q8NF86 280 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 RDH11Q8TC12 318 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 ASB11Q8WXH4 323 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 DLG3Q92796 817 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 LOXL4Q96JB6 756 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 HIST1H2AHQ96KK5 128 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 FERD3LQ96RJ6 166 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 ATOH8Q96SQ7 321 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 HIST1H2AJQ99878 128 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 H2AFJQ9BTM1 129 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 MECRQ9BV79 373 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 TRIM54Q9BYV2 358 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 SMOC1Q9H4F8 434 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 ERVMER34-1Q9H9K5 563 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 PARVBQ9HBI1 364 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 NUDT4Q9NZJ9 180 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 SCHIP1Q9P0W5 487 aaPredicted RBP10.18□□□□□ -0.78
TPM1-221ENST00000559831 COPG2Q9UBF2 871 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 SLC6A14Q9UN76 642 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 PDE10AQ9Y233 779 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 TDRKHQ9Y2W6 561 aaKnown RBP10.18□□□□□ -0.78
TPM1-221ENST00000559831 OARD1Q9Y530 152 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 MUC3AQ02505 3323 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 PCM1Q15154 2024 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 CCDC189A1A4V9 331 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 KRT87PA6NCN2 255 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 TARM1B6A8C7 271 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 GFYI3L273 518 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 FFAR2O15552 330 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 AQP9O43315 295 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 DLX3O60479 287 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 PIAS2O75928 621 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 C1orf105O95561 183 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 RPN2P04844 631 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 BPGMP07738 259 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 ANXA6P08133 673 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 ENO2P09104 434 aaPredicted RBP10.17□□□□□ -0.78
TPM1-221ENST00000559831 DHRS4L1P0CG22 281 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 TPBGLP0DKB5 382 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 MTHFD1P11586 935 aaKnown RBP10.17□□□□□ -0.78
TPM1-221ENST00000559831 F3P13726 295 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 ATP5F1P24539 256 aaPredicted RBP10.17□□□□□ -0.78
TPM1-221ENST00000559831 ALDH3A1P30838 453 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 RPIAP49247 311 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 ARRB1P49407 418 aaPredicted RBP10.17□□□□□ -0.78
TPM1-221ENST00000559831 TCF15Q12870 199 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 BNIP3Q12983 259 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 PRKG2Q13237 762 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 TGFBIQ15582 683 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 RPE65Q16518 533 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 PPP1R3AQ16821 1122 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 PFKFB4Q16877 469 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 HLA-BQ31612 363 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 CCSMST1Q4G0I0 132 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.17□□□□□ -0.78
TPM1-221ENST00000559831 TTC19Q6DKK2 380 aaPredicted RBP10.17□□□□□ -0.78
TPM1-221ENST00000559831 LAIR1Q6GTX8 287 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 CAPRIN2Q6IMN6 1127 aaKnown RBP10.17□□□□□ -0.78
TPM1-221ENST00000559831 TTC23LQ6PF05 361 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 NUDCD3Q8IVD9 361 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 C10orf107Q8IVU9 208 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 TRIM48Q8IWZ4 208 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 FBXO39Q8N4B4 442 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 PTGR2Q8N8N7 351 aaPredicted RBP10.17□□□□□ -0.78
TPM1-221ENST00000559831 OR5AR1Q8NGP9 310 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 PPP1R14CQ8TAE6 165 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 MCOLN3Q8TDD5 553 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 ZDHHC1Q8WTX9 485 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 SREK1Q8WXA9 508 aaKnown RBP10.17□□□□□ -0.78
TPM1-221ENST00000559831 ATOH1Q92858 354 aaPredicted RBP10.17□□□□□ -0.78
TPM1-221ENST00000559831 CXorf40BQ96DE9 158 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 PHF21BQ96EK2 531 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 ELF4Q99607 663 aaPredicted RBP10.17□□□□□ -0.78
TPM1-221ENST00000559831 PRRX2Q99811 253 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 HGH1Q9BTY7 390 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 GTPBP2Q9BX10 602 aaKnown RBP10.17□□□□□ -0.78
TPM1-221ENST00000559831 SLC12A9Q9BXP2 914 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 NUSAP1Q9BXS6 441 aaKnown RBP10.17□□□□□ -0.78
TPM1-221ENST00000559831 TRIT1Q9H3H1 467 aaKnown RBP10.17□□□□□ -0.78
TPM1-221ENST00000559831 UCKL1Q9NWZ5 548 aa10.17□□□□□ -0.78
TPM1-221ENST00000559831 ARL15Q9NXU5 204 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms