RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 PANX3Q96QZ0 392 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 AARSD1Q9BTE6 412 aaKnown RBP18.19■□□□□ 0.5
CASC4-209ENST00000559222 TSSK1BQ9BXA7 367 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 EPB41L1Q9H4G0 881 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 PPANQ9NQ55 473 aaKnown RBP18.19■□□□□ 0.5
CASC4-209ENST00000559222 ZDHHC18Q9NUE0 388 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 DKK4Q9UBT3 224 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 TDRKHQ9Y2W6 561 aaKnown RBP18.19■□□□□ 0.5
CASC4-209ENST00000559222 PCDHGA8Q9Y5G5 932 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 HEBP2Q9Y5Z4 205 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 CTAGE15A4D2H0 777 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 OR5K3A6NET4 321 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 BTN3A1O00481 513 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 AHSGP02765 367 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 CTAGE8P0CG41 777 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 FGF3P11487 239 aaPredicted RBP18.18■□□□□ 0.5
CASC4-209ENST00000559222 POLR2CP19387 275 aaPredicted RBP18.18■□□□□ 0.5
CASC4-209ENST00000559222 CHRM3P20309 590 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 SSTR1P30872 391 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 MAPK10P53779 464 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 GRB7Q14451 532 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 TMED2Q15363 201 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 TBC1D25Q3MII6 688 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 ZNF449Q6P9G9 518 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 OTOAQ7RTW8 1153 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 CTAGE6Q86UF2 777 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 CCDC25Q86WR0 208 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 CTAGE4Q8IX94 777 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 ZBTB2Q8N680 514 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 CALML6Q8TD86 181 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 ASZ1Q8WWH4 475 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 SEC14L1Q92503 715 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 SLC46A1Q96NT5 459 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 DPYSL5Q9BPU6 564 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 MVB12BQ9H7P6 319 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 FOXJ2Q9P0K8 574 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 COLEC10Q9Y6Z7 277 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 USP24Q9UPU5 2620 aa18.18■□□□□ 0.5
CASC4-209ENST00000559222 APC2O95996 2303 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 IGHV5-51A0A0C4DH38 117 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 TMEM8BA6NDV4 472 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 EFCAB7A8K855 629 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 CDRT15L2A8MXV6 281 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 F8W8V4 182 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 TMX2-CTNND1H3BSU7 103 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 DXOO77932 396 aaKnown RBP18.17■□□□□ 0.5
CASC4-209ENST00000559222 JMJD7P0C870 316 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 NDUFS1P28331 727 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 SEPHS1P49903 392 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 KPNA2P52292 529 aaKnown RBP18.17■□□□□ 0.5
CASC4-209ENST00000559222 CDKN2DP55273 166 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 GPX6P59796 221 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 TRA2AQ13595 282 aaKnown RBP eCLIP18.17■□□□□ 0.5
CASC4-209ENST00000559222 PLEKHS1Q5SXH7 462 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 PLXDC1Q8IUK5 500 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 LMNTD2Q8IXW0 634 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 BMPERQ8N8U9 685 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 OR5K2Q8NHB8 316 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 GSDMBQ8TAX9 411 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 LCN9Q8WX39 176 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 IL17FQ96PD4 163 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 GPR21Q99679 349 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 MAP3K3Q99759 626 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 CMKLR1Q99788 373 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 TRIT1Q9H3H1 467 aaKnown RBP18.17■□□□□ 0.5
CASC4-209ENST00000559222 HRASLS2Q9NWW9 162 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 MOCS1Q9NZB8 636 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 SDK2Q58EX2 2172 aa18.17■□□□□ 0.5
CASC4-209ENST00000559222 CXorf49A8MYA2 514 aaPredicted RBP18.16■□□□□ 0.5
CASC4-209ENST00000559222 C9orf172C9J069 976 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 E5RI56 91 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 H3BMM5 538 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 HGSO14964 777 aaPredicted RBP18.16■□□□□ 0.5
CASC4-209ENST00000559222 PFDN6O15212 129 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 PRAMEF10O60809 474 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 C1QAP02745 245 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 PEBP1P30086 187 aaKnown RBP18.16■□□□□ 0.5
CASC4-209ENST00000559222 SH3BP2P78314 561 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 PLOD1Q02809 727 aaPredicted RBP18.16■□□□□ 0.5
CASC4-209ENST00000559222 TUBB2AQ13885 445 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 IGF2-ASQ6U949 168 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 OOSP2Q86WS3 158 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 FAM129CQ86XR2 697 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 TBC1D21Q8IYX1 336 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 ADGRF3Q8IZF5 1079 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 MNS1Q8NEH6 495 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 CD200R1Q8TD46 325 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 PYROXD1Q8WU10 500 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 ZFPM2Q8WW38 1151 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 USP7Q93009 1102 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 MENTQ9BUN1 341 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 TUBB2BQ9BVA1 445 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 RAB33BQ9H082 229 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 SRMSQ9H3Y6 488 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 TFB2MQ9H5Q4 396 aaKnown RBP18.16■□□□□ 0.5
CASC4-209ENST00000559222 APMAPQ9HDC9 416 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 LATS2Q9NRM7 1088 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 SIDT1Q9NXL6 827 aaKnown RBP18.16■□□□□ 0.5
CASC4-209ENST00000559222 SPHK1Q9NYA1 384 aa18.16■□□□□ 0.5
CASC4-209ENST00000559222 EPHA6Q9UF33 1036 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms