RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 OTOAQ7RTW8 1153 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 PIWIL4Q7Z3Z4 852 aaKnown RBP11.12□□□□□ -0.63
SNX1-204ENST00000559061 STRA8Q7Z7C7 330 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 SLC26A11Q86WA9 606 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 CEP97Q8IW35 865 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 TRIM48Q8IWZ4 208 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 PALM2Q8IXS6 379 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 LINC01555Q8NAE3 123 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 RCBTB1Q8NDN9 531 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 OR5K2Q8NHB8 316 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 ASZ1Q8WWH4 475 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 PMEPA1Q969W9 287 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 TMEM159Q96B96 161 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 VPS39Q96JC1 886 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 CCDC74BQ96LY2 380 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 FERD3LQ96RJ6 166 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 ZFATQ9P243 1243 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 KLHL42Q9P2K6 505 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 VPS9D1Q9Y2B5 631 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 MTO1Q9Y2Z2 717 aaKnown RBP11.12□□□□□ -0.63
SNX1-204ENST00000559061 CEP295Q9C0D2 2601 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 OR5K3A6NET4 321 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 ARHGEF33A8MVX0 844 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 BTN3A1O00481 513 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 C1orf105O95561 183 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 HGFP14210 728 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 CHRM3P20309 590 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 MCM3P25205 808 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 GCAP28676 217 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 TNFRSF8P28908 595 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 PKLRP30613 574 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 ETV5P41161 510 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 TAS2R39P59534 338 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 ZXDCQ2QGD7 858 aaPredicted RBP11.11□□□□□ -0.63
SNX1-204ENST00000559061 KLHL38Q2WGJ6 581 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 MAP9Q49MG5 647 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 TMEM71Q6P5X7 295 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 WDR74Q6RFH5 385 aaPredicted RBP11.11□□□□□ -0.63
SNX1-204ENST00000559061 PAQR3Q6TCH7 311 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 UNC5DQ6UXZ4 953 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 ARHGAP22Q7Z5H3 698 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 RBM12BQ8IXT5 1001 aaKnown RBP11.11□□□□□ -0.63
SNX1-204ENST00000559061 ADGRF3Q8IZF5 1079 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 GALNT15Q8N3T1 639 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 BMPERQ8N8U9 685 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 AVL9Q8NBF6 648 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 OR4D9Q8NGE8 314 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 OR10G6Q8NH81 332 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 WDR48Q8TAF3 677 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 ZFPM2Q8WW38 1151 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 SH3KBP1Q96B97 665 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 IL17FQ96PD4 163 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 DEPDC7Q96QD5 511 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 RBBP8Q99708 897 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 ABCG4Q9H172 646 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 RHOJQ9H4E5 214 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 TFB2MQ9H5Q4 396 aaKnown RBP11.11□□□□□ -0.63
SNX1-204ENST00000559061 MVB12BQ9H7P6 319 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 SPHK1Q9NYA1 384 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 SEMA5BQ9P283 1151 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.11□□□□□ -0.63
SNX1-204ENST00000559061 ADAMTS6Q9UKP5 1117 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 ANGPTL2Q9UKU9 493 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 ASF1AQ9Y294 204 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 COMMD10Q9Y6G5 202 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 V9GYY5 206 aaPredicted RBP11.11□□□□□ -0.63
SNX1-204ENST00000559061 ZFHX4Q86UP3 3567 aa11.11□□□□□ -0.63
SNX1-204ENST00000559061 FAM95CA0A1B0GW59 222 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 C1QTNF9BB2RNN3 333 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 AGRPO00253 132 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 IFRD1O00458 451 aaPredicted RBP11.1□□□□□ -0.63
SNX1-204ENST00000559061 CAPN5O15484 640 aaPredicted RBP11.1□□□□□ -0.63
SNX1-204ENST00000559061 DUX1O43812 170 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 PSIP1O75475 530 aaKnown RBP11.1□□□□□ -0.63
SNX1-204ENST00000559061 ACSL3O95573 720 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 C1QTNF9P0C862 333 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 ERGP11308 486 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 JUPP14923 745 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 KPNA2P52292 529 aaKnown RBP11.1□□□□□ -0.63
SNX1-204ENST00000559061 INHBCP55103 352 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 VSNL1P62760 191 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 PLOD1Q02809 727 aaPredicted RBP11.1□□□□□ -0.63
SNX1-204ENST00000559061 NAA30Q147X3 362 aaPredicted RBP11.1□□□□□ -0.63
SNX1-204ENST00000559061 TMED2Q15363 201 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 CLPPQ16740 277 aaPredicted RBP11.1□□□□□ -0.63
SNX1-204ENST00000559061 DNTTIP2Q5QJE6 756 aaKnown RBP11.1□□□□□ -0.63
SNX1-204ENST00000559061 FBXO38Q6PIJ6 1188 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 NEK10Q6ZWH5 1172 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 IFT20Q8IY31 132 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 TBC1D21Q8IYX1 336 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 PPM1NQ8N819 430 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 GPATCH11Q8N954 259 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 OR4E2Q8NGC2 313 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 CFAP61Q8NHU2 1237 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 EEF1AKMT1Q8WVE0 214 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 ANKRD49Q8WVL7 239 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 NCSTNQ92542 709 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 INPP5DQ92835 1189 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 LIN37Q96GY3 246 aaPredicted RBP11.1□□□□□ -0.63
SNX1-204ENST00000559061 GPR22Q99680 433 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms