RNA–Protein interactions for RNA: ENST00000558555.5

MEIS3-204, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 1,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-204ENST00000558555 SUSD2Q9UGT4 822 aa23.32■■□□□ 1.32
MEIS3-204ENST00000558555 FRYLO94915 3013 aa23.32■■□□□ 1.32
MEIS3-204ENST00000558555 SERPINE1P05121 402 aa23.31■■□□□ 1.32
MEIS3-204ENST00000558555 FGF3P11487 239 aaPredicted RBP23.31■■□□□ 1.32
MEIS3-204ENST00000558555 CTSEP14091 401 aa23.31■■□□□ 1.32
MEIS3-204ENST00000558555 GRK2P25098 689 aa23.31■■□□□ 1.32
MEIS3-204ENST00000558555 RPL10P27635 214 aaKnown RBP23.31■■□□□ 1.32
MEIS3-204ENST00000558555 CSNK1EP49674 416 aaKnown RBP23.31■■□□□ 1.32
MEIS3-204ENST00000558555 RGS9BPQ6ZS82 235 aa23.31■■□□□ 1.32
MEIS3-204ENST00000558555 PTGR2Q8N8N7 351 aaPredicted RBP23.31■■□□□ 1.32
MEIS3-204ENST00000558555 ARL15Q9NXU5 204 aa23.31■■□□□ 1.32
MEIS3-204ENST00000558555 PDE10AQ9Y233 779 aa23.31■■□□□ 1.32
MEIS3-204ENST00000558555 RIF1Q5UIP0 2472 aaKnown RBP23.31■■□□□ 1.32
MEIS3-204ENST00000558555 A0A1B0GTW7 788 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 PDZK1P1A8MUH7 402 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 TCP11X1B4DZS4 312 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 KLF11O14901 512 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 GUCA1CO95843 209 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 RPN2P04844 631 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 ACADLP28330 430 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 ALDH18A1P54886 795 aaKnown RBP23.3■■□□□ 1.32
MEIS3-204ENST00000558555 AP1S2P56377 157 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 NXPH1P58417 271 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 STX3Q13277 289 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 ZNF542PQ5EBM4 170 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 CDKL4Q5MAI5 379 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 ZCCHC23Q6ZST2 131 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 ZC3H10Q96K80 434 aaKnown RBP23.3■■□□□ 1.32
MEIS3-204ENST00000558555 GSDMCQ9BYG8 508 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 SDK1Q7Z5N4 2213 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 TNRC6BQ9UPQ9 1833 aaKnown RBP23.3■■□□□ 1.32
MEIS3-204ENST00000558555 PRR19A6NJB7 356 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 KLK8O60259 260 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 SHOX2O60902 331 aaPredicted RBP23.3■■□□□ 1.32
MEIS3-204ENST00000558555 ANXA5P08758 320 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 JUNDP17535 347 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 HOXD11P31277 338 aaPredicted RBP23.3■■□□□ 1.32
MEIS3-204ENST00000558555 ACTR1BP42025 376 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 ACTR1AP61163 376 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 CDKL1Q00532 357 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 CFAP157Q5JU67 520 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 TTC23LQ6PF05 361 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 SPATS2Q86XZ4 545 aaKnown RBP23.3■■□□□ 1.32
MEIS3-204ENST00000558555 RASGRP3Q8IV61 690 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 CCNYL1Q8N7R7 359 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 PDPRQ8NCN5 879 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 SPDYE1Q8NFV5 336 aaPredicted RBP23.3■■□□□ 1.32
MEIS3-204ENST00000558555 MAGEC3Q8TD91 643 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 TFGQ92734 400 aaPredicted RBP23.3■■□□□ 1.32
MEIS3-204ENST00000558555 RMDN2Q96LZ7 410 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 ZDHHC5Q9C0B5 715 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 APOBEC3BQ9UH17 382 aaKnown RBP23.3■■□□□ 1.32
MEIS3-204ENST00000558555 ASF1AQ9Y294 204 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 PCDHGA2Q9Y5H1 932 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 FANCMQ8IYD8 2048 aa23.3■■□□□ 1.32
MEIS3-204ENST00000558555 ATXN2Q99700 1313 aaKnown RBP23.29■■□□□ 1.32
MEIS3-204ENST00000558555 ARHGEF33A8MVX0 844 aa23.29■■□□□ 1.32
MEIS3-204ENST00000558555 STX16-NPEPL1H3BU86 382 aa23.29■■□□□ 1.32
MEIS3-204ENST00000558555 STX16O14662 325 aa23.29■■□□□ 1.32
MEIS3-204ENST00000558555 VIMP08670 466 aaKnown RBP23.29■■□□□ 1.32
MEIS3-204ENST00000558555 IMPDH1P20839 514 aa23.29■■□□□ 1.32
MEIS3-204ENST00000558555 AK4P27144 223 aaPredicted RBP23.29■■□□□ 1.32
MEIS3-204ENST00000558555 HALP42357 657 aa23.29■■□□□ 1.32
MEIS3-204ENST00000558555 NAGLUP54802 743 aa23.29■■□□□ 1.32
MEIS3-204ENST00000558555 TCEA2Q15560 299 aa23.29■■□□□ 1.32
MEIS3-204ENST00000558555 SULT1C3Q6IMI6 304 aa23.29■■□□□ 1.32
MEIS3-204ENST00000558555 SLC30A9Q6PML9 568 aa23.29■■□□□ 1.32
MEIS3-204ENST00000558555 ZBTB44Q8NCP5 570 aa23.29■■□□□ 1.32
MEIS3-204ENST00000558555 GATA5Q9BWX5 397 aaPredicted RBP23.29■■□□□ 1.32
MEIS3-204ENST00000558555 CFAP54Q96N23 3096 aa23.29■■□□□ 1.32
MEIS3-204ENST00000558555 TDRD6O60522 2096 aaKnown RBP23.29■■□□□ 1.32
MEIS3-204ENST00000558555 C1orf105O95561 183 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 CSF2P04141 144 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 BDKRB1P46663 353 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 HERVK_113P63132 956 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 UAP1L1Q3KQV9 507 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 CAPRIN2Q6IMN6 1127 aaKnown RBP23.28■■□□□ 1.32
MEIS3-204ENST00000558555 TCAIMQ8N3R3 496 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 FBXO15Q8NCQ5 510 aaPredicted RBP23.28■■□□□ 1.32
MEIS3-204ENST00000558555 GPBAR1Q8TDU6 330 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 L3HYPDHQ96EM0 354 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 C12orf66Q96MD2 445 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 TMEM237Q96Q45 408 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 ERVK-6Q9BXR3 956 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 TCEAL2Q9H3H9 227 aaPredicted RBP23.28■■□□□ 1.32
MEIS3-204ENST00000558555 KLF15Q9UIH9 416 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 R4GN57 208 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 TP53BP1Q12888 1972 aaPredicted RBP23.28■■□□□ 1.32
MEIS3-204ENST00000558555 KNL1Q8NG31 2342 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 NME1P15531 152 aaKnown RBP23.28■■□□□ 1.32
MEIS3-204ENST00000558555 NBL1P41271 181 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 BST1Q10588 318 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 SIM2Q14190 667 aaPredicted RBP23.28■■□□□ 1.32
MEIS3-204ENST00000558555 SETDB1Q15047 1291 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 WASH2PQ6VEQ5 465 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 CCL4L1Q8NHW4 92 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 CHMP6Q96FZ7 201 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 WASH6PQ9NQA3 447 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 PRDM8Q9NQV8 689 aa23.28■■□□□ 1.32
MEIS3-204ENST00000558555 WWOXQ9NZC7 414 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms