RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 PRPF39Q86UA1 669 aaKnown RBP3.22□□□□□ -1.89
HERC1-203ENST00000558532 MMAAQ8IVH4 418 aaKnown RBP3.22□□□□□ -1.89
HERC1-203ENST00000558532 PEX5LQ8IYB4 626 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 FBXW8Q8N3Y1 598 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 NAT8LQ8N9F0 302 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 GLIS1Q8NBF1 620 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 DDHD1Q8NEL9 900 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 TSPAN14Q8NG11 270 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 PPP4R1Q8TF05 950 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 SLC20A1Q8WUM9 679 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 C1orf54Q8WWF1 131 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 SLC44A1Q8WWI5 657 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 HSPH1Q92598 858 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 TANKQ92844 425 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 ATP6V0A1Q93050 837 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 TOP1MTQ969P6 601 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 C12orf43Q96C57 262 aaKnown RBP3.22□□□□□ -1.89
HERC1-203ENST00000558532 NSUN4Q96CB9 384 aaKnown RBP3.22□□□□□ -1.89
HERC1-203ENST00000558532 TMA16Q96EY4 203 aaKnown RBP3.22□□□□□ -1.89
HERC1-203ENST00000558532 CNDP1Q96KN2 507 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 RIPOR3Q96MK2 946 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 HS6ST2Q96MM7 605 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 ZMAT2Q96NC0 199 aaKnown RBP3.22□□□□□ -1.89
HERC1-203ENST00000558532 GCNAQ96QF7 691 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 PRPF18Q99633 342 aaKnown RBP3.22□□□□□ -1.89
HERC1-203ENST00000558532 TUBA1CQ9BQE3 449 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 TMEM47Q9BQJ4 181 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 REEP2Q9BRK0 252 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 NUP85Q9BW27 656 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 OSBPL11Q9BXB4 747 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 FRMD8P1Q9BZ68 369 aaPredicted RBP3.22□□□□□ -1.89
HERC1-203ENST00000558532 SLC29A3Q9BZD2 475 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 GCOM2Q9BZD3 368 aaPredicted RBP3.22□□□□□ -1.89
HERC1-203ENST00000558532 NUF2Q9BZD4 464 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 PCDHAC1Q9H158 963 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 PSTPIP2Q9H939 334 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 CD209Q9NNX6 404 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 SAYSD1Q9NPB0 183 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 ACP6Q9NPH0 428 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 NRIP3Q9NQ35 241 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 ATAD3AQ9NVI7 634 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 DNAJC17Q9NVM6 304 aaKnown RBP3.22□□□□□ -1.89
HERC1-203ENST00000558532 GID8Q9NWU2 228 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 SELENONQ9NZV5 590 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 HACD3Q9P035 362 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 FNIP2Q9P278 1114 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 ARMCX1Q9P291 453 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 SLC17A7Q9P2U7 560 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 PCDHGB4Q9UN71 923 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 ERVK-11Q9UQG0 969 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 IFT52Q9Y366 437 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 COQ4Q9Y3A0 265 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 ZNF711Q9Y462 761 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 PCDHGB5Q9Y5G0 923 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 ZHX2Q9Y6X8 837 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 PTPRFP10586 1907 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 TAF1P21675 1872 aa3.22□□□□□ -1.89
HERC1-203ENST00000558532 A0A087WXM4 84 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 GSTTP1A0A1W2PQM5 241 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 FAM234BA2RU67 622 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 TSPY2A6NKD2 308 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 C16orf96A6NNT2 1141 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 TTC34A8MYJ7 566 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 KCNU1A8MYU2 1149 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 I3L4J1 428 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 PSMD12O00232 456 aaPredicted RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 ATP2A1O14983 1001 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 PFDN6O15212 129 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 SCO2O43819 266 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 IDH3BO43837 385 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 MED24O75448 989 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 PROSCO94903 275 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 ZBTB11O95625 1053 aaPredicted RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 BAG2O95816 211 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 GSRP00390 522 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 TMIGD3P0DMS9 266 aaPredicted RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 RALAP11233 206 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 UNGP13051 313 aaPredicted RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 PSMC3P17980 439 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 TKTP29401 623 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 NMT1P30419 496 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 ACADSBP45954 432 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 NDST2P52849 883 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 C21orf59P57076 290 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 SNRPFP62306 86 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 DYNLL1P63167 89 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 MRPS5P82675 430 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 COG7P83436 770 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 CNTN2Q02246 1040 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 CFHR1Q03591 330 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 CDC20Q12834 499 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 PDIA2Q13087 525 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 ALCAMQ13740 583 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 UBE4AQ14139 1066 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 C16orf72Q14CZ0 275 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 TRIP13Q15645 432 aaPredicted RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 TAZQ16635 292 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 RGS21Q2M5E4 152 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 GRAMD1BQ3KR37 738 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 SMUG1Q53HV7 270 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms