RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 C11orf96Q7Z7L8 435 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 RBM12BQ8IXT5 1001 aaKnown RBP16.23■□□□□ 0.19
NEK9-211ENST00000557673 NXPE1Q8N323 547 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 GALNT6Q8NCL4 622 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 ZNF398Q8TD17 642 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 SEC14L1Q92503 715 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 TTC25Q96NG3 672 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 TGM7Q96PF1 710 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 OR6C1Q96RD1 312 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 LRRC1Q9BTT6 524 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 ASB8Q9H765 288 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 SAMD15Q9P1V8 674 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 ANAPC5Q9UJX4 755 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 PADI1Q9ULC6 663 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 SLC30A1Q9Y6M5 507 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 FAM237BA0A1B0GVD1 139 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 PIPSLA2A3N6 862 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 BLACEA4D250 179 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 OR51F1A6NGY5 319 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 SDR42E2A6NKP2 422 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 VPS4BO75351 444 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 BANF1O75531 89 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 KIAA0754O94854 1291 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 TYRP1P17643 537 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 ARNTP27540 789 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 RPL10P27635 214 aaKnown RBP16.22■□□□□ 0.19
NEK9-211ENST00000557673 SEPHS1P49903 392 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 PMS2P54278 862 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 DRG2P55039 364 aaKnown RBP16.22■□□□□ 0.19
NEK9-211ENST00000557673 SLC7A5Q01650 507 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 CACNG1Q06432 222 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 DHX9Q08211 1270 aaKnown RBP16.22■□□□□ 0.19
NEK9-211ENST00000557673 CALCOCO2Q13137 446 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 GPR33Q49SQ1 333 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.22■□□□□ 0.19
NEK9-211ENST00000557673 MSS51Q4VC12 460 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 LDLRAP1Q5SW96 308 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 FNBP1LQ5T0N5 605 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 CASC4Q6P4E1 433 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 EFCAB3Q8N7B9 438 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 HDAC10Q969S8 669 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 ULK4Q96C45 1275 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 MFSD3Q96ES6 412 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 SIGLEC10Q96LC7 697 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 PWWP2AQ96N64 755 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 WDR83Q9BRX9 315 aaKnown RBP16.22■□□□□ 0.19
NEK9-211ENST00000557673 TRIM56Q9BRZ2 755 aaKnown RBP16.22■□□□□ 0.19
NEK9-211ENST00000557673 ZCCHC2Q9C0B9 1178 aaKnown RBP16.22■□□□□ 0.19
NEK9-211ENST00000557673 TWSG1Q9GZX9 223 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 POT1Q9NUX5 634 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 ZNF624Q9P2J8 865 aaPredicted RBP16.22■□□□□ 0.19
NEK9-211ENST00000557673 LNPEPQ9UIQ6 1025 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 CRLS1Q9UJA2 301 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 VPS4AQ9UN37 437 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 PCDHGA6Q9Y5G7 932 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 TEX15Q9BXT5 2789 aa16.22■□□□□ 0.19
NEK9-211ENST00000557673 USP9XQ93008 2570 aaPredicted RBP16.21■□□□□ 0.19
NEK9-211ENST00000557673 OR2AG2A6NM03 316 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 C21orf140B9A014 251 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 BHMG1C9JSJ3 638 aaPredicted RBP16.21■□□□□ 0.19
NEK9-211ENST00000557673 CREG1O75629 220 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 GOT2P00505 430 aaKnown RBP16.21■□□□□ 0.19
NEK9-211ENST00000557673 PRSS56P0CW18 603 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 FGF5P12034 268 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 BRAFP15056 766 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 ZNF28P17035 718 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 AKT1P31749 480 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 SLC19A1P41440 591 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 MLLT10P55197 1068 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 ARL4CP56559 192 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 PRAMEP78395 509 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 BBS9Q3SYG4 887 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 ZRANB3Q5FWF4 1079 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 KIAA0930Q6ICG6 404 aaPredicted RBP16.21■□□□□ 0.19
NEK9-211ENST00000557673 CES3Q6UWW8 571 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 PRSS42Q7Z5A4 293 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 PPP1R3BQ86XI6 285 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 APLFQ8IW19 511 aaPredicted RBP16.21■□□□□ 0.19
NEK9-211ENST00000557673 PIANPQ8IYJ0 282 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 PDIK1LQ8N165 341 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 LRRN4CLQ8ND94 238 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 NAT14Q8WUY8 206 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 ZNF669Q96BR6 464 aaPredicted RBP16.21■□□□□ 0.19
NEK9-211ENST00000557673 SGSM3Q96HU1 749 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 PDE7BQ9NP56 450 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 OGFRQ9NZT2 677 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 TLK1Q9UKI8 766 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 MAD1L1Q9Y6D9 718 aa16.21■□□□□ 0.19
NEK9-211ENST00000557673 SPTAN1Q13813 2472 aaKnown RBP16.21■□□□□ 0.18
NEK9-211ENST00000557673 RP1L1Q8IWN7 2480 aaPredicted RBP16.21■□□□□ 0.18
NEK9-211ENST00000557673 IGLV3-16A0A075B6K0 115 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 ESYT3A0FGR9 886 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 CDC14CA4D256 554 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 OR52A4PA6NMU1 304 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 SPAG6O75602 509 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 POP7O75817 140 aaKnown RBP16.2■□□□□ 0.18
NEK9-211ENST00000557673 VCLP18206 1134 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 IDSP22304 550 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 ACRV1P26436 265 aa16.2■□□□□ 0.18
NEK9-211ENST00000557673 PBLDP30039 288 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms