RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 JUNDP17535 347 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 PFKLP17858 780 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 IL1RNP18510 177 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 ACVR2AP27037 513 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 ALDH4A1P30038 563 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 ST13P50502 369 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 HUNKP57058 714 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 VBP1P61758 197 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 CCL15Q16663 113 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 SMU1Q2TAY7 513 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 PGS1Q32NB8 556 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 INAVAQ3KP66 663 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 ZRANB3Q5FWF4 1079 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 SYT6Q5T7P8 510 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 ATG9BQ674R7 924 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 GCNT7Q6ZNI0 430 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 ADAMTSL2Q86TH1 951 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 EFHD2Q96C19 240 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 ZNF300Q96RE9 604 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 DUSP21Q9H596 190 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 IPPKQ9H8X2 491 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 SACM1LQ9NTJ5 587 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 ANKMY1Q9P2S6 941 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 FKBPLQ9UIM3 349 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 ZMYM5Q9UJ78 669 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 ARIH1Q9Y4X5 557 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 U3KQV3 271 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 FAM220BPB1ANY3 271 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 ZNF623O75123 536 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 PGRP06401 933 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 PSMB9P28065 219 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 FMO3P31513 532 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 MAP2K4P45985 399 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 GPR15P49685 360 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 CXCR4P61073 352 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 C18orf21Q32NC0 220 aaPredicted RBP11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 SPANXN4Q5MJ08 99 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 CACHD1Q5VU97 1274 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 TMEM236Q5W0B7 351 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 CCDC81Q6ZN84 652 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 DET1Q7L5Y6 550 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 B3GNT8Q7Z7M8 397 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 CARNMT1Q8N4J0 409 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 SVOPQ8N4V2 548 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 ERLEC1Q96DZ1 483 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 FAM120BQ96EK7 910 aaKnown RBP11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 CINPQ9BW66 212 aaPredicted RBP11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 OLA1Q9NTK5 396 aaKnown RBP11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 MARCH2Q9P0N8 246 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 SCHIP1Q9P0W5 487 aaPredicted RBP11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 PCDHB8Q9UN66 801 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 HSPE1-MOB4S4R3N1 261 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 PMF1-BGLAPU3KQ54 211 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 SLC12A8A0AV02 714 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 SLC28A1O00337 649 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 SEC24AO95486 1093 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 ESR1P03372 595 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 EIF2S1P05198 315 aaKnown RBP11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 SLC35A2P78381 396 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 TRAF3Q13114 568 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 CLCA4Q14CN2 919 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 SHQ1Q6PI26 577 aaKnown RBP11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 PRSS48Q7RTY5 328 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 SLC22A16Q86VW1 577 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 DNAJB8Q8NHS0 232 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 PYURFQ96I23 114 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 C8orf48Q96LL4 319 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 RIBC2Q9H4K1 309 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 KAT8Q9H7Z6 458 aaKnown RBP11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 PCDH12Q9NPG4 1184 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 C1orf109Q9NX04 203 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 FNDC3AQ9Y2H6 1198 aaKnown RBP11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 CCL27Q9Y4X3 112 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 PCDHB14Q9Y5E9 798 aa11.59□□□□□ -0.55
VIPAS39-211ENST00000557658 UTRNP46939 3433 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 F8W810 466 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 RAD51BO15315 384 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 INSIG1O15503 277 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 MITFO75030 526 aaPredicted RBP11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 PABPC1P11940 636 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 FSHRP23945 695 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 CD6P30203 668 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 SERPINB1P30740 379 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 PTGER3P43115 390 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 PURAQ00577 322 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 MVKQ03426 396 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 KEAP1Q14145 624 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 C10orf120Q5SQS8 335 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 GALNT5Q7Z7M9 940 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 PHACTR4Q8IZ21 702 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 LIX1Q8N485 282 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 LPCAT1Q8NF37 534 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 NETO1Q8TDF5 533 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 STARD8Q92502 1023 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 PDLIM5Q96HC4 596 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 DACH2Q96NX9 599 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 PSKH2Q96QS6 385 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 OR52E6Q96RD3 313 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 ANKHQ9HCJ1 492 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 CCNB1IP1Q9NPC3 277 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms