RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 KRT222Q8N1A0 295 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 LCN9Q8WX39 176 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 USP7Q93009 1102 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 TAAR9Q96RI9 348 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 TUBB2BQ9BVA1 445 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 RAB17Q9H0T7 212 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 CCDC68Q9H2F9 335 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 TRIT1Q9H3H1 467 aaKnown RBP12.16□□□□□ -0.46
SLIRP-211ENST00000557623 SRMSQ9H3Y6 488 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 TFB2MQ9H5Q4 396 aaKnown RBP12.16□□□□□ -0.46
SLIRP-211ENST00000557623 HRASLS2Q9NWW9 162 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 IL1RAPL1Q9NZN1 696 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 WHRNQ9P202 907 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 CRYL1Q9Y2S2 319 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 SNX24Q9Y343 169 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 UTP11Q9Y3A2 253 aaKnown RBP12.16□□□□□ -0.46
SLIRP-211ENST00000557623 MRFAP1Q9Y605 127 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 COMMD10Q9Y6G5 202 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 OR6C74A6NCV1 312 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 EFCAB7A8K855 629 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 E5RI56 91 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 AGRPO00253 132 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 RAD51CO43502 376 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 SLCO2B1O94956 709 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 FGF3P11487 239 aaPredicted RBP12.15□□□□□ -0.46
SLIRP-211ENST00000557623 CCL4P13236 92 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 PKMP14618 531 aaKnown RBP12.15□□□□□ -0.46
SLIRP-211ENST00000557623 CHRM3P20309 590 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 CD82P27701 267 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 SLC5A2P31639 672 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 ETV5P41161 510 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 CSE1LP55060 971 aaKnown RBP12.15□□□□□ -0.46
SLIRP-211ENST00000557623 MC2RQ01718 297 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 MSS51Q4VC12 460 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 HSP90AA5PQ58FG0 334 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 CTSL3PQ5NE16 218 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 DNTTIP2Q5QJE6 756 aaKnown RBP12.15□□□□□ -0.46
SLIRP-211ENST00000557623 PLEKHS1Q5SXH7 462 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 CACHD1Q5VU97 1274 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 CYB5D1Q6P9G0 228 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 NAPRTQ6XQN6 538 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 CARFQ8N187 725 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 PHC3Q8NDX5 983 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 OR4E2Q8NGC2 313 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 OR52E1Q8NGJ3 308 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 OR5K2Q8NHB8 316 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 LKAAEAR1Q8TD35 194 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 KCNE4Q8WWG9 221 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 JPH3Q8WXH2 748 aaPredicted RBP12.15□□□□□ -0.46
SLIRP-211ENST00000557623 UBXN4Q92575 508 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 ZNF592Q92610 1267 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 BIRC8Q96P09 236 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 TEFMQ96QE5 360 aaKnown RBP12.15□□□□□ -0.46
SLIRP-211ENST00000557623 HGH1Q9BTY7 390 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 DDA1Q9BW61 102 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 ASPSCR1Q9BZE9 553 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 DPH1Q9BZG8 443 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 ZNF768Q9H5H4 540 aaKnown RBP12.15□□□□□ -0.46
SLIRP-211ENST00000557623 SLC39A1Q9NY26 324 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 ZC3H7BQ9UGR2 993 aaKnown RBP12.15□□□□□ -0.46
SLIRP-211ENST00000557623 FBXO5Q9UKT4 447 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 ACSL6Q9UKU0 697 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 CDYLQ9Y232 598 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 PCDHGA3Q9Y5H0 932 aa12.15□□□□□ -0.46
SLIRP-211ENST00000557623 CHD8Q9HCK8 2581 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 TLCD2A6NGC4 264 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 PRAMEF10O60809 474 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 SHMT2P34897 504 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 ELK3P41970 407 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 SLC1A2P43004 574 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 LEPRP48357 1165 aaKnown RBP12.14□□□□□ -0.47
SLIRP-211ENST00000557623 GUCA2AQ02747 115 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 CBLBQ13191 982 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 PRKG2Q13237 762 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 CTBP1Q13363 440 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 DCAF12Q5T6F0 453 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 TTC23LQ6PF05 361 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 UNC5DQ6UXZ4 953 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 CEACAM20Q6UY09 585 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 FAM92BQ6ZTR7 304 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 AMIGO1Q86WK6 493 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 KMT5CQ86Y97 462 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 DENND6AQ8IWF6 608 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 BMPERQ8N8U9 685 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 OR5AR1Q8NGP9 310 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 KLHL6Q8WZ60 621 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 ART4Q93070 314 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 CERS2Q96G23 380 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 FOPNLQ96NB1 174 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 ZPBPQ9BS86 351 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 DPH5Q9H2P9 285 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 FBXO8Q9NRD0 319 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 FBXO6Q9NRD1 293 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-211ENST00000557623 LATS2Q9NRM7 1088 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 IARS2Q9NSE4 1012 aaKnown RBP12.14□□□□□ -0.47
SLIRP-211ENST00000557623 OCIAD1Q9NX40 245 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 SEMA5BQ9P283 1151 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 CHMP2BQ9UQN3 213 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 PCDHB11Q9Y5F2 797 aa12.14□□□□□ -0.47
SLIRP-211ENST00000557623 TEX264Q9Y6I9 313 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms