RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 FAM60AQ9NP50 221 aa17.72■□□□□ 0.43
ABCD4-228ENST00000557588 CTTNBP2NLQ9P2B4 639 aa17.72■□□□□ 0.43
ABCD4-228ENST00000557588 COPG2Q9UBF2 871 aa17.72■□□□□ 0.43
ABCD4-228ENST00000557588 CCDC168Q8NDH2 2452 aa17.72■□□□□ 0.43
ABCD4-228ENST00000557588 ZSCAN9O15535 394 aaPredicted RBP17.71■□□□□ 0.43
ABCD4-228ENST00000557588 ZFXP17010 805 aaPredicted RBP17.71■□□□□ 0.43
ABCD4-228ENST00000557588 NFKB1P19838 968 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 PTGER4P35408 488 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 TNNT3P45378 269 aaPredicted RBP17.71■□□□□ 0.43
ABCD4-228ENST00000557588 FOXL2P58012 376 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 ART3Q13508 389 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 ZNF169Q14929 603 aaPredicted RBP17.71■□□□□ 0.43
ABCD4-228ENST00000557588 SLC1A5Q15758 541 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 SARM1Q6SZW1 724 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 SPESP1Q6UW49 350 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 FJX1Q86VR8 437 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 AMIGO1Q86WK6 493 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 CFAP206Q8IYR0 622 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 ADGRF3Q8IZF5 1079 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 SLC25A41Q8N5S1 370 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 NRTNQ99748 197 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 OR52A5Q9H2C5 316 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 SLC6A20Q9NP91 592 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 ACTR10Q9NZ32 417 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 FBXL4Q9UKA2 621 aa17.71■□□□□ 0.43
ABCD4-228ENST00000557588 KLF2Q9Y5W3 355 aaPredicted RBP17.71■□□□□ 0.43
ABCD4-228ENST00000557588 NF1P21359 2839 aa17.71■□□□□ 0.42
ABCD4-228ENST00000557588 HCRTR1O43613 425 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 WASHC5Q12768 1159 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 SLC9A5Q14940 896 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 DEFB110Q30KQ9 67 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 NKAIN1Q4KMZ8 207 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 AGAP7PQ5VUJ5 663 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 PRAMEF13Q5VWM6 474 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 FCRL6Q6DN72 434 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 CLEC17AQ6ZS10 378 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 GDF7Q7Z4P5 450 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 TMEM151BQ8IW70 566 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 N4BP2L2Q92802 583 aaPredicted RBP17.7■□□□□ 0.42
ABCD4-228ENST00000557588 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.7■□□□□ 0.421e-7■■■■□ 20
ABCD4-228ENST00000557588 OXNAD1Q96HP4 312 aaPredicted RBP17.7■□□□□ 0.42
ABCD4-228ENST00000557588 RBM41Q96IZ5 413 aaKnown RBP17.7■□□□□ 0.42
ABCD4-228ENST00000557588 NAP1L5Q96NT1 182 aaPredicted RBP17.7■□□□□ 0.42
ABCD4-228ENST00000557588 AGAP4Q96P64 663 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 FERD3LQ96RJ6 166 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 SPRTNQ9H040 489 aaPredicted RBP17.7■□□□□ 0.42
ABCD4-228ENST00000557588 DEF6Q9H4E7 631 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 MVB12BQ9H7P6 319 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 COG4Q9H9E3 785 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 DHCR7Q9UBM7 475 aaKnown RBP17.7■□□□□ 0.42
ABCD4-228ENST00000557588 DCHS2Q6V1P9 2916 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 CNTRLQ7Z7A1 2325 aa17.7■□□□□ 0.42
ABCD4-228ENST00000557588 TACC2O95359 2948 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 C17orf113A0A1B0GUU1 675 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 AGAP14A8MT82 685 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 STX7O15400 261 aaKnown RBP17.69■□□□□ 0.42
ABCD4-228ENST00000557588 SRP72O76094 671 aaKnown RBP17.69■□□□□ 0.42
ABCD4-228ENST00000557588 MMP11P24347 488 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 CD151P48509 253 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 OTUD4Q01804 1114 aaKnown RBP17.69■□□□□ 0.42
ABCD4-228ENST00000557588 CDC16Q13042 620 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 BOP1Q14137 746 aaKnown RBP17.69■□□□□ 0.42
ABCD4-228ENST00000557588 PTPRCAPQ14761 206 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 TLR1Q15399 786 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 NFKBIBQ15653 356 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 ZIC1Q15915 447 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 ZNF658BQ4V348 819 aaPredicted RBP17.69■□□□□ 0.42
ABCD4-228ENST00000557588 FAM180AQ6UWF9 173 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 DNAJB14Q8TBM8 379 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 RELTQ969Z4 430 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 LURAP1Q96LR2 239 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 BPIFA3Q9BQP9 254 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 MAK16Q9BXY0 300 aaKnown RBP17.69■□□□□ 0.42
ABCD4-228ENST00000557588 ASB8Q9H765 288 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 TXLNGQ9NUQ3 528 aa17.69■□□□□ 0.42
ABCD4-228ENST00000557588 IFRD1O00458 451 aaPredicted RBP17.68■□□□□ 0.42
ABCD4-228ENST00000557588 TLDC1Q6P9B6 456 aa17.68■□□□□ 0.42
ABCD4-228ENST00000557588 TRIM73Q86UV7 250 aa17.68■□□□□ 0.42
ABCD4-228ENST00000557588 IPMKQ8NFU5 416 aa17.68■□□□□ 0.42
ABCD4-228ENST00000557588 FKBP10Q96AY3 582 aa17.68■□□□□ 0.42
ABCD4-228ENST00000557588 DCUN1D1Q96GG9 259 aa17.68■□□□□ 0.42
ABCD4-228ENST00000557588 CNDP1Q96KN2 507 aa17.68■□□□□ 0.42
ABCD4-228ENST00000557588 FCRL5Q96RD9 977 aa17.68■□□□□ 0.42
ABCD4-228ENST00000557588 TRIM56Q9BRZ2 755 aaKnown RBP17.68■□□□□ 0.42
ABCD4-228ENST00000557588 HGH1Q9BTY7 390 aa17.68■□□□□ 0.42
ABCD4-228ENST00000557588 NAT10Q9H0A0 1025 aaKnown RBP17.68■□□□□ 0.42
ABCD4-228ENST00000557588 XKR8Q9H6D3 395 aa17.68■□□□□ 0.42
ABCD4-228ENST00000557588 EPS8L2Q9H6S3 715 aa17.68■□□□□ 0.42
ABCD4-228ENST00000557588 SLC22A11Q9NSA0 550 aa17.68■□□□□ 0.42
ABCD4-228ENST00000557588 OLAHQ9NV23 265 aa17.68■□□□□ 0.42
ABCD4-228ENST00000557588 ICKQ9UPZ9 632 aa17.68■□□□□ 0.42
ABCD4-228ENST00000557588 ARL5AQ9Y689 179 aa17.68■□□□□ 0.42
ABCD4-228ENST00000557588 KRT1P04264 644 aa17.67■□□□□ 0.42
ABCD4-228ENST00000557588 CTSBP07858 339 aa17.67■□□□□ 0.42
ABCD4-228ENST00000557588 H2AFZP0C0S5 128 aa17.67■□□□□ 0.42
ABCD4-228ENST00000557588 RALBP11234 206 aa17.67■□□□□ 0.42
ABCD4-228ENST00000557588 UGT2B7P16662 529 aa17.67■□□□□ 0.42
ABCD4-228ENST00000557588 GCGRP47871 477 aa17.67■□□□□ 0.42
ABCD4-228ENST00000557588 DYNLT1P63172 113 aa17.67■□□□□ 0.42
ABCD4-228ENST00000557588 TYRO3Q06418 890 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms