RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 MILR1Q7Z6M3 343 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 LRRTM4Q86VH4 590 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 ZNF547Q8IVP9 402 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 KIF2BQ8N4N8 673 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 FBXO15Q8NCQ5 510 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-233ENST00000557529 MAGEB10Q96LZ2 347 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-233ENST00000557529 CCDC138Q96M89 665 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 CATSPER2Q96P56 530 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 KCNA7Q96RP8 456 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 NTMT1Q9BV86 223 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 RMI1Q9H9A7 625 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 MBNL1Q9NR56 388 aaKnown RBP12.19□□□□□ -0.46
SHMT2-233ENST00000557529 RIC8BQ9NVN3 520 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 TMEM98Q9Y2Y6 226 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 A0A1B0GTL3 188 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 TCRBV21S2A2A0A5A6 115 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 PRR23AA6NEV1 266 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 ARHGEF33A8MVX0 844 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 B2RBV5 119 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 LOC730098B7Z3J9 87 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 KMOO15229 486 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 GYG2O15488 501 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 EBLN1P0CF75 366 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 THRAP10827 490 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 MYCLP1P12525 358 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-233ENST00000557529 HGFP14210 728 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 NDUFV2P19404 249 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 PIK3R1P27986 724 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 PRDX3P30048 256 aaKnown RBP12.18□□□□□ -0.46
SHMT2-233ENST00000557529 HMOX2P30519 316 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 ATP4BP51164 291 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 KCNJ2P63252 427 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 PRKCQQ04759 706 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 TRAF3Q13114 568 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 SQLEQ14534 574 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 DNAL1Q4LDG9 190 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 TMEM198Q66K66 360 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 GPR153Q6NV75 609 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 LETMD1Q6P1Q0 360 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 TMEM92Q6UXU6 159 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 MBOAT1Q6ZNC8 495 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 C11orf96Q7Z7L8 435 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 AMZ2Q86W34 360 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 SYNPOQ8N3V7 929 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 OXR1Q8N573 874 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 CDYL2Q8N8U2 506 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 DENND6BQ8NEG7 585 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 OR4F6Q8NGB9 312 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 OR52B6Q8NGF0 335 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 CFAP61Q8NHU2 1237 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 METTL6Q8TCB7 284 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 SLC29A3Q9BZD2 475 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 OSBPL6Q9BZF3 934 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 POLMQ9NP87 494 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-233ENST00000557529 KLC4Q9NSK0 619 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 DNAJC11Q9NVH1 559 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 GULP1Q9UBP9 304 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 TRPS1Q9UHF7 1281 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 ZNF225Q9UK10 706 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 NDRG2Q9UN36 371 aaKnown RBP12.18□□□□□ -0.46
SHMT2-233ENST00000557529 DUSP12Q9UNI6 340 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 TIMM22Q9Y584 194 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 COPG1Q9Y678 874 aaKnown RBP12.18□□□□□ -0.46
SHMT2-233ENST00000557529 TRPM6Q9BX84 2022 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 LRRC72A6NJI9 287 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 CACNB4O00305 520 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-233ENST00000557529 WDR47O94967 919 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 CAPN1P07384 714 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 LINC00032P0C843 101 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 COX4I1P13073 169 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 LBPP18428 481 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 GDF5P43026 501 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 DGKEP52429 567 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 STX1BP61266 288 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 MXRA7P84157 204 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 LRRC32Q14392 662 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 MAPRE2Q15555 327 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 ZRSR2Q15696 482 aaKnown RBP12.18□□□□□ -0.46
SHMT2-233ENST00000557529 XKR7Q5GH72 579 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 UNC5DQ6UXZ4 953 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 RINLQ6ZS11 566 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 RNF165Q6ZSG1 346 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 TRIM69Q86WT6 500 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 KLHDC8AQ8IYD2 350 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 ARHGAP24Q8N264 748 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 LILRA3Q8N6C8 439 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-233ENST00000557529 SNX31Q8N9S9 440 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 OR2T34Q8NGX1 318 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 RP9Q8TA86 221 aaKnown RBP12.18□□□□□ -0.46
SHMT2-233ENST00000557529 MAGEC3Q8TD91 643 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 KLK6Q92876 244 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 FOXJ1Q92949 421 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 TUBGCP3Q96CW5 907 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 C3orf30Q96M34 536 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 LGR4Q9BXB1 951 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 TBC1D10AQ9BXI6 508 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 C1orf21Q9H246 121 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 TUBB1Q9H4B7 451 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 AKTIPQ9H8T0 292 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 SGK2Q9HBY8 427 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms