RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 ZDHHC3Q9NYG2 299 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 FEZ2Q9UHY8 353 aaPredicted RBP17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 NOTCH2Q04721 2471 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 SEC16AO15027 2179 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 BTN3A3O00478 584 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 PJA2O43164 708 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 RBP3P10745 1247 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 PVRP15151 417 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 OTX2P32243 289 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 MC4RP32245 332 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 CD151P48509 253 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 RPA4Q13156 261 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 PRR30Q53SZ7 412 aaPredicted RBP17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 ZNF789Q5FWF6 425 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 DARS2Q6PI48 645 aaKnown RBP17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 TMTC1Q8IUR5 882 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 GLIS1Q8NBF1 620 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 PNPLA2Q96AD5 504 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 DNAJC1Q96KC8 554 aaKnown RBP17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 SPATA13Q96N96 652 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 TRAPPC9Q96Q05 1148 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 C19orf43Q9BQ61 176 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 OR52A5Q9H2C5 316 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 TFB2MQ9H5Q4 396 aaKnown RBP17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 CASS4Q9NQ75 786 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 ACTR10Q9NZ32 417 aa17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 GPN3Q9UHW5 284 aaPredicted RBP17.09■□□□□ 0.33
SDR39U1-219ENST00000556523 CCL22O00626 93 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 ZNF749O43361 778 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 ZNF189O75820 626 aaPredicted RBP17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 CAPN1P07384 714 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 GSTM1P09488 218 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 CETN2P41208 172 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 GSTM4Q03013 218 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 PRKG2Q13237 762 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 RAPSNQ13702 412 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 SPA17Q15506 151 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 VWA5B1Q5TIE3 1220 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 HIST2H2BCQ6DN03 193 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 SPESP1Q6UW49 350 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 TAS2R42Q7RTR8 314 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 ZBTB2Q8N680 514 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 C19orf47Q8N9M1 422 aaKnown RBP17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 PHC3Q8NDX5 983 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 CCDC110Q8TBZ0 833 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 ANP32BQ92688 251 aaKnown RBP17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 TFGQ92734 400 aaPredicted RBP17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 IP6K3Q96PC2 410 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 XKR8Q9H6D3 395 aa17.08■□□□□ 0.32
SDR39U1-219ENST00000556523 SPENQ96T58 3664 aaKnown RBP17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 IGLV3-16A0A075B6K0 115 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 SEMA7AO75326 666 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 ALPPP05187 535 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 ACRV1P26436 265 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 SHMT2P34897 504 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 CTNNA1P35221 906 aaKnown RBP17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 BOP1Q14137 746 aaKnown RBP17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 CDHR3Q6ZTQ4 885 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 MRGPREQ86SM8 312 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 SERPINA9Q86WD7 417 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 CLEC1AQ8NC01 280 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 FER1L6-AS2Q96M78 137 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 SMAD5Q99717 465 aaKnown RBP17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 BAG1Q99933 345 aaPredicted RBP17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 OSBPL8Q9BZF1 889 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 IRAK4Q9NWZ3 460 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 NDOR1Q9UHB4 597 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 EFR3BQ9Y2G0 817 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 PCDHA13Q9Y5I0 950 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 AP1M2Q9Y6Q5 423 aa17.07■□□□□ 0.32
SDR39U1-219ENST00000556523 PIKFYVEQ9Y2I7 2098 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 PEX12O00623 359 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 KLHL41O60662 606 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 OR2B3O76000 313 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 DDAH2O95865 285 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 IGHEP01854 428 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 ATXN8OSP0DMR3 200 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 PDHA2P29803 388 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 CYLC1P35663 651 aaPredicted RBP17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 FOLR3P41439 243 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 MRPL49Q13405 166 aaKnown RBP17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 SPARCL1Q14515 664 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 MLIPQ5VWP3 458 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 TRIM73Q86UV7 250 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 ADGRF3Q8IZF5 1079 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 IQCKQ8N0W5 287 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 RBMXL3Q8N7X1 1067 aaKnown RBP17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 Q8NA96 180 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 ALS2CR12Q96Q35 445 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 FAM118BQ9BPY3 351 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 ARNT2Q9HBZ2 717 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 C5AR2Q9P296 337 aa17.06■□□□□ 0.32
SDR39U1-219ENST00000556523 HIVEP3Q5T1R4 2406 aa17.05■□□□□ 0.32
SDR39U1-219ENST00000556523 TRBV5-4A0A0C4DH59 114 aa17.05■□□□□ 0.32
SDR39U1-219ENST00000556523 A1L4Q6 167 aa17.05■□□□□ 0.32
SDR39U1-219ENST00000556523 TCP11X1B4DZS4 312 aa17.05■□□□□ 0.32
SDR39U1-219ENST00000556523 QSOX1O00391 747 aa17.05■□□□□ 0.32
SDR39U1-219ENST00000556523 LIN7AO14910 233 aaPredicted RBP17.05■□□□□ 0.32
SDR39U1-219ENST00000556523 LDB2O43679 373 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms