RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CCDC78A2IDD5 438 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 IFRD1O00458 451 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-219ENST00000556432 CCL21O00585 134 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 PYGMP11217 842 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 PRKCIP41743 596 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 SLC14A2Q15849 920 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 ZNF630Q2M218 657 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-219ENST00000556432 CPNE8Q86YQ8 564 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 TMEM151BQ8IW70 566 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 ZNF808Q8N4W9 903 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-219ENST00000556432 OR1N1Q8NGS0 311 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 FAF2Q96CS3 445 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 DCUN1D1Q96GG9 259 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 CCDC120Q96HB5 630 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 NDC1Q9BTX1 674 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 HGH1Q9BTY7 390 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 TRIM8Q9BZR9 551 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 GLOD4Q9HC38 313 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 ACTR10Q9NZ32 417 aa13.45□□□□□ -0.26
ACTN1-219ENST00000556432 LRRC10BA6NIK2 292 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 PPP1R12AO14974 1030 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-219ENST00000556432 PRAMEF1O95521 474 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 ALAS2P22557 587 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 MMP11P24347 488 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 PRKG2Q13237 762 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 PDK1Q15118 436 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 SIRPB2Q5JXA9 342 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 SARM1Q6SZW1 724 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 SPESP1Q6UW49 350 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 IGFL2Q6UWQ7 119 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 TMEM207Q6UWW9 146 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 AMIGO1Q86WK6 493 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 CATSPER1Q8NEC5 780 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 OR52E1Q8NGJ3 308 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 HM13Q8TCT9 377 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 ZNF398Q8TD17 642 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.44□□□□□ -0.26
ACTN1-219ENST00000556432 TADA1Q96BN2 335 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 THOC3Q96J01 351 aaKnown RBP13.44□□□□□ -0.26
ACTN1-219ENST00000556432 LHPPQ9H008 270 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 FAM60AQ9NP50 221 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 IL17CQ9P0M4 197 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 PCM1Q15154 2024 aa13.44□□□□□ -0.26
ACTN1-219ENST00000556432 NAV3Q8IVL0 2385 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 LRRD1A4D1F6 860 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 PCDH17O14917 1159 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 STX7O15400 261 aaKnown RBP13.43□□□□□ -0.26
ACTN1-219ENST00000556432 CYP1A2P05177 515 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 UQCRHP07919 91 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 SSTR2P30874 369 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 CHRNA4P43681 627 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 WNT3AP56704 352 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 TAS2R40P59535 323 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 ARG2P78540 354 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 TUBB8Q3ZCM7 444 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 BCL7AQ4VC05 210 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 MRPL14Q6P1L8 145 aaKnown RBP13.43□□□□□ -0.26
ACTN1-219ENST00000556432 MTFR2Q6P444 385 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 TLDC1Q6P9B6 456 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 ISLR2Q6UXK2 745 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 RPTNQ6XPR3 784 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 APTXQ7Z2E3 356 aaKnown RBP13.43□□□□□ -0.26
ACTN1-219ENST00000556432 CDH24Q86UP0 819 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 PLD5Q8N7P1 536 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 PHC3Q8NDX5 983 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 DTX3LQ8TDB6 740 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 DOCK10Q96BY6 2186 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 RNF157Q96PX1 679 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 PCNX1Q96RV3 2341 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 MAK16Q9BXY0 300 aaKnown RBP13.43□□□□□ -0.26
ACTN1-219ENST00000556432 SMOXQ9NWM0 555 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 HACD3Q9P035 362 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 FAM153AQ9UHL3 310 aa13.43□□□□□ -0.26
ACTN1-219ENST00000556432 GAPDHSO14556 408 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-219ENST00000556432 APOL1O14791 398 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 HCRTR1O43613 425 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 UNC5CO95185 931 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 RALBP11234 206 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 UGT2B7P16662 529 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 TMPRSS15P98073 1019 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 NFKBIBQ15653 356 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 RBBP7Q16576 425 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 ZNF449Q6P9G9 518 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 NPNTQ6UXI9 565 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 SHISA6Q6ZSJ9 500 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 ADGRF3Q8IZF5 1079 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 RAPGEF5Q92565 580 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 NR4A3Q92570 626 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 NACC2Q96BF6 587 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 VPS50Q96JG6 964 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 TFB2MQ9H5Q4 396 aaKnown RBP13.42□□□□□ -0.26
ACTN1-219ENST00000556432 MVB12BQ9H7P6 319 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 MRM3Q9HC36 420 aaKnown RBP13.42□□□□□ -0.26
ACTN1-219ENST00000556432 ANO10Q9NW15 660 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 CRLS1Q9UJA2 301 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 AKAP9Q99996 3911 aa13.42□□□□□ -0.26
ACTN1-219ENST00000556432 ANKRD12Q6UB98 2062 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 DYTNA2CJ06 578 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 SOCS6O14544 535 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 KCNN4O15554 427 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms