RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PRKRAO75569 313 aaKnown RBP3□□□□□ -1.93
SNX6-204ENST00000555541 RSL1D1O76021 490 aaKnown RBP3□□□□□ -1.93
SNX6-204ENST00000555541 SCGB1D1O95968 90 aa3□□□□□ -1.93
SNX6-204ENST00000555541 PRLRP16471 622 aa3□□□□□ -1.93
SNX6-204ENST00000555541 CA4P22748 312 aa3□□□□□ -1.93
SNX6-204ENST00000555541 MAN1A1P33908 653 aa3□□□□□ -1.93
SNX6-204ENST00000555541 ARL3P36405 182 aa3□□□□□ -1.93
SNX6-204ENST00000555541 CDH8P55286 799 aa3□□□□□ -1.93
SNX6-204ENST00000555541 PRKCZQ05513 592 aa3□□□□□ -1.93
SNX6-204ENST00000555541 MELKQ14680 651 aa3□□□□□ -1.93
SNX6-204ENST00000555541 TAF13Q15543 124 aa3□□□□□ -1.93
SNX6-204ENST00000555541 JAKMIP3Q5VZ66 844 aa3□□□□□ -1.93
SNX6-204ENST00000555541 IKBIPQ70UQ0 350 aa3□□□□□ -1.93
SNX6-204ENST00000555541 CHST9Q7L1S5 443 aa3□□□□□ -1.93
SNX6-204ENST00000555541 LSMEM2Q8N112 164 aa3□□□□□ -1.93
SNX6-204ENST00000555541 WDTC1Q8N5D0 677 aa3□□□□□ -1.93
SNX6-204ENST00000555541 PRSS33Q8NF86 280 aa3□□□□□ -1.93
SNX6-204ENST00000555541 UCMAQ8WVF2 138 aa3□□□□□ -1.93
SNX6-204ENST00000555541 SUSD6Q92537 303 aa3□□□□□ -1.93
SNX6-204ENST00000555541 DYRK2Q92630 601 aa3□□□□□ -1.93
SNX6-204ENST00000555541 MTERF3Q96E29 417 aa3□□□□□ -1.93
SNX6-204ENST00000555541 SRSF8Q9BRL6 282 aaKnown RBP3□□□□□ -1.93
SNX6-204ENST00000555541 VN1R1Q9GZP7 353 aa3□□□□□ -1.93
SNX6-204ENST00000555541 ARRDC1-AS1Q9H2J1 176 aa3□□□□□ -1.93
SNX6-204ENST00000555541 TAB2Q9NYJ8 693 aa3□□□□□ -1.93
SNX6-204ENST00000555541 AASSQ9UDR5 926 aa3□□□□□ -1.93
SNX6-204ENST00000555541 OSGIN1Q9UJX0 560 aa3□□□□□ -1.93
SNX6-204ENST00000555541 ABCA7Q8IZY2 2146 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 RUSC2Q8N2Y8 1516 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 A0A1W2PPR1 153 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 MSGN1A6NI15 193 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 J3KRW8 73 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 KLF11O14901 512 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 CD4P01730 458 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 RB1P06400 928 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 GPIP06744 558 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 TM4SF1P30408 202 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 B3GALT5-AS1P59052 145 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 CX3CL1P78423 397 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 MAMLD1Q13495 774 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 KCNC3Q14003 757 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 DLG2Q15700 870 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 PAQR6Q6TCH4 344 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 IL27RAQ6UWB1 636 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 INTS8Q75QN2 995 aaKnown RBP2.99□□□□□ -1.93
SNX6-204ENST00000555541 MARVELD2Q8N4S9 558 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 DCLK2Q8N568 766 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 MAPKAPK5-AS1Q8N8E1 139 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 KBTBD8Q8NFY9 601 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 OR4C3Q8NH37 302 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 RNF128Q8TEB7 428 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 SCFD2Q8WU76 684 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 USP6NLQ92738 828 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 ERLEC1Q96DZ1 483 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 PIGQQ9BRB3 760 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 C16orf70Q9BSU1 422 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 A4GALTQ9NPC4 353 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 OLA1Q9NTK5 396 aaKnown RBP2.99□□□□□ -1.93
SNX6-204ENST00000555541 TAS2R14Q9NYV8 317 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 RIPK3Q9Y572 518 aa2.99□□□□□ -1.93
SNX6-204ENST00000555541 A0A087X0M5 115 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 A0A1B0GX30 115 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 EPM2AB3EWF7 344 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 TRIM49P0CI25 452 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 TRIM49CP0CI26 452 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 CA6P23280 308 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 SETQ01105 290 aaPredicted RBP2.98□□□□□ -1.93
SNX6-204ENST00000555541 KRT32Q14532 448 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 SGSM1Q2NKQ1 1148 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 FAM98BQ52LJ0 330 aaKnown RBP2.98□□□□□ -1.93
SNX6-204ENST00000555541 MDH1BQ5I0G3 518 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 HAUS3Q68CZ6 603 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 Q6ZR54 194 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 RAB42Q8N4Z0 105 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 PPFIBP2Q8ND30 876 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 OR5AP2Q8NGF4 316 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 CEP295NLQ96MC4 621 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 FUCA2Q9BTY2 467 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 CLEC7AQ9BXN2 247 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 PITPNM3Q9BZ71 974 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 PPIL3Q9H2H8 161 aaKnown RBP2.98□□□□□ -1.93
SNX6-204ENST00000555541 SDR39U1Q9NRG7 319 aaPredicted RBP2.98□□□□□ -1.93
SNX6-204ENST00000555541 ERAP1Q9NZ08 941 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 RHCGQ9UBD6 479 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 EPHA6Q9UF33 1036 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 ZDHHC2Q9UIJ5 367 aa2.98□□□□□ -1.93
SNX6-204ENST00000555541 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.98□□□□□ -1.93
SNX6-204ENST00000555541 GAPDHSO14556 408 aaPredicted RBP2.97□□□□□ -1.93
SNX6-204ENST00000555541 SSX4O60224 188 aa2.97□□□□□ -1.93
SNX6-204ENST00000555541 MITFO75030 526 aaPredicted RBP2.97□□□□□ -1.93
SNX6-204ENST00000555541 CLTBP09497 229 aa2.97□□□□□ -1.93
SNX6-204ENST00000555541 MMP9P14780 707 aa2.97□□□□□ -1.93
SNX6-204ENST00000555541 HNF4AP41235 474 aa2.97□□□□□ -1.93
SNX6-204ENST00000555541 SUOXP51687 545 aa2.97□□□□□ -1.93
SNX6-204ENST00000555541 COX10Q12887 443 aa2.97□□□□□ -1.93
SNX6-204ENST00000555541 FASTKD1Q53R41 847 aaKnown RBP2.97□□□□□ -1.93
SNX6-204ENST00000555541 EXOC8Q8IYI6 725 aa2.97□□□□□ -1.93
SNX6-204ENST00000555541 ADGRF2Q8IZF7 708 aa2.97□□□□□ -1.93
SNX6-204ENST00000555541 LRRC59Q96AG4 307 aaKnown RBP2.97□□□□□ -1.93
SNX6-204ENST00000555541 OR6C1Q96RD1 312 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms