RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 SPTBN4Q9H254 2564 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 DMDP11532 3685 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 SPAARA0A1B0GVQ0 90 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 DCDC2BA2VCK2 349 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 A6NCN8 305 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 PRR19A6NJB7 356 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 VIPP01282 170 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 RPN2P04844 631 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 MPOP05164 745 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 SBK3P0C264 359 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 SLC35E2BP0CK96 405 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 GLB1P16278 677 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 ITGB6P18564 788 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 NDUFS1P28331 727 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 TYK2P29597 1187 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 FASLGP48023 281 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 PREPP48147 710 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 ACADVLP49748 655 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 MAZP56270 477 aaKnown RBP10.66□□□□□ -0.7
SHMT2-218ENST00000555213 IRF9Q00978 393 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 HHEXQ03014 270 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 HSPA14Q0VDF9 509 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 KRT33BQ14525 404 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 CTSL3PQ5NE16 218 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 UGT3A1Q6NUS8 523 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 C16orf46Q6P387 395 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 GUSBP11Q6P575 273 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 ABRAXAS1Q6UWZ7 409 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 PDZD3Q86UT5 571 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 RBM12BQ8IXT5 1001 aaKnown RBP10.66□□□□□ -0.7
SHMT2-218ENST00000555213 NAGSQ8N159 534 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 ARL14Q8N4G2 192 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 GPATCH11Q8N954 259 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 WDR48Q8TAF3 677 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 IFI44Q8TCB0 444 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 SLC37A2Q8TED4 501 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 SKA2Q8WVK7 121 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-218ENST00000555213 CCDC74AQ96AQ1 378 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 APOPT1Q96IL0 206 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 C12orf66Q96MD2 445 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 NDNQ99608 321 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 SELENOSQ9BQE4 189 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 AARSD1Q9BTE6 412 aaKnown RBP10.66□□□□□ -0.7
SHMT2-218ENST00000555213 CAPS2Q9BXY5 557 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-218ENST00000555213 ZMYND15Q9H091 742 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 ABCG4Q9H172 646 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 MLXIPLQ9NP71 852 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 SARS2Q9NP81 518 aaKnown RBP10.66□□□□□ -0.7
SHMT2-218ENST00000555213 PSD3Q9NYI0 1048 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 TMEM216Q9P0N5 145 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 CPNE7Q9UBL6 633 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 PSMD13Q9UNM6 376 aa10.66□□□□□ -0.7
SHMT2-218ENST00000555213 A0A096LPK6 155 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 LY6G6EA0A0G2JKS1 128 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 EME2A4GXA9 379 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-218ENST00000555213 OR52A4PA6NMU1 304 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 IQCF5A8MTL0 148 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 TARM1B6A8C7 271 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 PHGDHO43175 533 aaKnown RBP10.65□□□□□ -0.7
SHMT2-218ENST00000555213 KDM1AO60341 852 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 NIPSNAP2O75323 286 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 EML2O95834 649 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 FTH1P19P0C7X4 201 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 MTHFD1P11586 935 aaKnown RBP10.65□□□□□ -0.7
SHMT2-218ENST00000555213 PNLIPP16233 465 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 XRCC1P18887 633 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-218ENST00000555213 FDXRP22570 491 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 AOAHP28039 575 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 CCR7P32248 378 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 PPM1FP49593 454 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-218ENST00000555213 E2F1Q01094 437 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 POU4F1Q01851 419 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 ZNF460Q14592 562 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 USP10Q14694 798 aaKnown RBP10.65□□□□□ -0.7
SHMT2-218ENST00000555213 PLEKHS1Q5SXH7 462 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 CES4AQ5XG92 561 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 LRRC8EQ6NSJ5 796 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 FAM45BPQ6NSW5 357 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 DGLUCYQ7Z3D6 616 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 C17orf82Q86X59 251 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-218ENST00000555213 CENPLQ8N0S6 344 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-218ENST00000555213 ZBTB2Q8N680 514 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 ANKRD42Q8N9B4 389 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 FAM45AQ8TCE6 357 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 ANKRD49Q8WVL7 239 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 CKAP2Q8WWK9 683 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 PATE1Q8WXA2 126 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 UBXN10Q96LJ8 280 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 RMDN2Q96LZ7 410 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 ZNF317Q96PQ6 595 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-218ENST00000555213 SLC38A3Q99624 504 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 CCDC134Q9H6E4 229 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 SYNDIG1Q9H7V2 258 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 IGSF5Q9NSI5 407 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 PCMTD2Q9NV79 361 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 INTS9Q9NV88 658 aaKnown RBP10.65□□□□□ -0.7
SHMT2-218ENST00000555213 TAS2R13Q9NYV9 303 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 KLHL42Q9P2K6 505 aa10.65□□□□□ -0.7
SHMT2-218ENST00000555213 LRIT1Q9P2V4 623 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms