RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 UMODL1-AS1Q8N2C9 162 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 MIER2Q8N344 545 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 NPWQ8N729 165 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 BOLLQ8N9W6 283 aaKnown RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 PDPRQ8NCN5 879 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 TOR1AIP2Q8NFQ8 470 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 OR2AP1Q8NGE2 309 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 OR6K2Q8NGY2 324 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 ADAMTS14Q8WXS8 1223 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 SYN2Q92777 582 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 KLK6Q92876 244 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF653Q96CK0 615 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 ARHGEF26Q96DR7 871 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 PPP1R16AQ96I34 528 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 SERAC1Q96JX3 654 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 EIF3CQ99613 913 aaKnown RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 DUSP26Q9BV47 211 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 ISCUQ9H1K1 167 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 MAGEH1Q9H213 219 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 DHX35Q9H5Z1 703 aaKnown RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 ZDHHC6Q9H6R6 413 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 CATSPERBQ9H7T0 1116 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 FZD3Q9NPG1 666 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 GDF3Q9NR23 364 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 AASDHPPTQ9NRN7 309 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 JKAMPQ9P055 326 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 IFNKQ9P0W0 207 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 CNOT8Q9UFF9 292 aaKnown RBP4.18□□□□□ -1.74
VTI1B-203ENST00000554636 CAPN11Q9UMQ6 739 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 MFHAS1Q9Y4C4 1052 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 NEUROG3Q9Y4Z2 214 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 FADS3Q9Y5Q0 445 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 WDFY3Q8IZQ1 3526 aa4.18□□□□□ -1.74
VTI1B-203ENST00000554636 FREM2Q5SZK8 3169 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ASXL3Q9C0F0 2248 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SHROOM3Q8TF72 1996 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 AKAP13Q12802 2813 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 A0A087X0T9 212 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 C16orf96A6NNT2 1141 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ALG1L2C9J202 215 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 PRAMEF26H0Y7S4 382 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 GOLGA6L19H0YKK7 550 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 J3KR12 359 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 EEF2KO00418 725 aaKnown RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 AREL1O15033 823 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SLC31A1O15431 190 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 YKT6O15498 198 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 DFNA5O60443 496 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 PRAMEF11O60813 436 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SLC43A1O75387 559 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 TRIM16O95361 564 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 PIGNO95427 931 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 IGSF6O95976 241 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SERPING1P05155 500 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 CYP1A2P05177 515 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 UGT2B4P06133 528 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 PROS1P07225 676 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ATXN1LP0C7T5 689 aaKnown RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 FAM228BP0C875 321 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ERCC2P18074 760 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 MALP21145 153 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 HNRNPA2B1P22626 353 aaKnown RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 HNRNPH3P31942 346 aaKnown RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 PCK1P35558 622 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 GRK6P43250 576 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 RGRP47804 291 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 DNA2P51530 1060 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF135P52742 658 aaPredicted RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 NDST2P52849 883 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 GEMIN4P57678 1058 aaKnown RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 CLDN2P57739 230 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 YBEYP58557 167 aaPredicted RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 RHOAP61586 193 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SNRPD1P62314 119 aaKnown RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ZBED6P86452 979 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SLC25A11Q02978 314 aaKnown RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 OVGP1Q12889 678 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF169Q14929 603 aaPredicted RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 DPYSL2Q16555 572 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ST3GAL2Q16842 350 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SMTNL2Q2TAL5 461 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 MYLK3Q32MK0 819 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 INO80DQ53TQ3 878 aaPredicted RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SLC45A4Q5BKX6 768 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF805Q5CZA5 627 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 LRRC73Q5JTD7 316 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 TPRG1LQ5T0D9 272 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ERMARDQ5T6L9 678 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 TXNRD3NBQ6F5E7 133 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 KIAA1161Q6NSJ0 714 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 KYAT3Q6YP21 454 aaKnown RBP4.17□□□□□ -1.74
VTI1B-203ENST00000554636 KDM7AQ6ZMT4 941 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 RFX8Q6ZV50 586 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ABI3BPQ7Z7G0 1075 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 CLNKQ7Z7G1 428 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 ZSCAN30Q86W11 494 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 PRIMA1Q86XR5 153 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 GATAD2AQ86YP4 633 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 SLC22A18ASQ8N1D0 253 aa4.17□□□□□ -1.74
VTI1B-203ENST00000554636 RYBPQ8N488 228 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms