RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 ITGA9Q13797 1035 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 CHRNA6Q15825 494 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-214ENST00000554604 TMEM164Q5U3C3 297 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 ZNF574Q6ZN55 896 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-214ENST00000554604 GPR155Q7Z3F1 870 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 TMEM135Q86UB9 458 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 TRIM48Q8IWZ4 208 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 OTUD6BQ8N6M0 293 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 RCBTB1Q8NDN9 531 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 OR4D9Q8NGE8 314 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 BRSK1Q8TDC3 778 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 LRRC8CQ8TDW0 803 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 ACMSDQ8TDX5 336 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 CERS2Q96G23 380 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 CCDC74BQ96LY2 380 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 PAIP2Q9BPZ3 127 aaKnown RBP12.19□□□□□ -0.46
SHMT2-214ENST00000554604 APOL2Q9BQE5 337 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 TRIM56Q9BRZ2 755 aaKnown RBP12.19□□□□□ -0.46
SHMT2-214ENST00000554604 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-214ENST00000554604 IL22Q9GZX6 179 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 PRORYQ9H606 182 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 PRDM8Q9NQV8 689 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 CPNE7Q9UBL6 633 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 GRID1Q9ULK0 1009 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 SDK2Q58EX2 2172 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 PIEZO2Q9H5I5 2752 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 A6NCN8 305 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 CCT8L1PA6NM43 557 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 EIF4E1BA6NMX2 242 aaKnown RBP12.18□□□□□ -0.46
SHMT2-214ENST00000554604 GOLGA8RI6L899 631 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 COPEO14579 308 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 NVLO15381 856 aaKnown RBP12.18□□□□□ -0.46
SHMT2-214ENST00000554604 UGT1A9O60656 530 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 RFPL1O75677 317 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 HOXB3P14651 431 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-214ENST00000554604 UGT1A6P19224 532 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 UGT1A1P22309 533 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 UGT1A4P22310 534 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 ADRA1DP25100 572 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 MPSTP25325 297 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 CSTF2P33240 577 aaKnown RBP eCLIP12.18□□□□□ -0.46
SHMT2-214ENST00000554604 UGT1A3P35503 534 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 ETV4P43268 484 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 MAPK9P45984 424 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 CLCNKAP51800 687 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 CRADDP78560 199 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 PDE1BQ01064 536 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 SQSTM1Q13501 440 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 TRA2AQ13595 282 aaKnown RBP eCLIP12.18□□□□□ -0.46
SHMT2-214ENST00000554604 C16orf72Q14CZ0 275 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 TAF1AQ15573 450 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-214ENST00000554604 KHDC1Q4VXA5 237 aaKnown RBP12.18□□□□□ -0.46
SHMT2-214ENST00000554604 LACTB2Q53H82 288 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-214ENST00000554604 LDLRAP1Q5SW96 308 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 TMEM71Q6P5X7 295 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 RANBP10Q6VN20 620 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 PACS1Q6VY07 963 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 CCDC121Q6ZUS5 278 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 SPATA21Q7Z572 469 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 DNAAF3Q8N9W5 541 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.18□□□□□ -0.46
SHMT2-214ENST00000554604 AGBL5Q8NDL9 886 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 DTX3LQ8TDB6 740 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 NCSTNQ92542 709 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 TIMM29Q9BSF4 260 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 PITPNM3Q9BZ71 974 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 UGT1A7Q9HAW7 530 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 UGT1A10Q9HAW8 530 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 UGT1A8Q9HAW9 530 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 CPNE5Q9HCH3 593 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 SLC23A2Q9UGH3 650 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 TMPRSS11EQ9UL52 423 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 SOX13Q9UN79 622 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 ARL5AQ9Y689 179 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 RPS6KL1Q9Y6S9 549 aa12.18□□□□□ -0.46
SHMT2-214ENST00000554604 PRAMEF33A0A0G2JMD5 474 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 HMX2A2RU54 273 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 MYO1CO00159 1063 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 PRAMEF10O60809 474 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 EDF1O60869 148 aaKnown RBP12.17□□□□□ -0.46
SHMT2-214ENST00000554604 PRAMEF1O95521 474 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 CRTAMO95727 393 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 VIPP01282 170 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 IDSP22304 550 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 RPL10P27635 214 aaKnown RBP12.17□□□□□ -0.46
SHMT2-214ENST00000554604 AKT1P31749 480 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 CSF2RBP32927 897 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 ADRA1AP35348 466 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 ETV5P41161 510 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 EPHA4P54764 986 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 OLIG2Q13516 323 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 PTPRCAPQ14761 206 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 ANKRD20A4Q4UJ75 823 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 SNAP47Q5SQN1 464 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 ARHGAP40Q5TG30 622 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 WDR74Q6RFH5 385 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-214ENST00000554604 ZNF547Q8IVP9 402 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 OR4K2Q8NGD2 314 aa12.17□□□□□ -0.46
SHMT2-214ENST00000554604 ZNF398Q8TD17 642 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms