RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 IFI35P80217 286 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-211ENST00000554437 TTC31Q49AM3 519 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-211ENST00000554437 DNAJC21Q5F1R6 531 aaKnown RBP4.7□□□□□ -1.66
SCFD1-211ENST00000554437 RPUSD3Q6P087 351 aaKnown RBP4.7□□□□□ -1.66
SCFD1-211ENST00000554437 FIGLAQ6QHK4 219 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 CEACAM20Q6UY09 585 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 MFSD6Q6ZSS7 791 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 CEP57Q86XR8 500 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 AFAP1Q8N556 730 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 MINDY1Q8N5J2 469 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 OR10V1Q8NGI7 309 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 GRAPLQ8TC17 118 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-211ENST00000554437 MGARPQ8TDB4 240 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 LPGAT1Q92604 370 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 ZNF622Q969S3 477 aaKnown RBP eCLIP4.7□□□□□ -1.66
SCFD1-211ENST00000554437 SNX21Q969T3 373 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 FNDC11Q9BVV2 318 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 MRPL1Q9BYD6 325 aaKnown RBP4.7□□□□□ -1.66
SCFD1-211ENST00000554437 OLFML3Q9NRN5 406 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 MTRRQ9UBK8 725 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 PPIEQ9UNP9 301 aaKnown RBP4.7□□□□□ -1.66
SCFD1-211ENST00000554437 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.7□□□□□ -1.663e-6■□□□□ 10.3
SCFD1-211ENST00000554437 GPRASP1Q5JY77 1395 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 GLOD5A6NK44 160 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 PMS2P5A8MQ11 134 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 HEPACAM2A8MVW5 462 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 SMIM1B2RUZ4 78 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 FGF5P12034 268 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 CDKN1AP38936 164 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 BPIFB3P59826 476 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 CDK3Q00526 305 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 BAATQ14032 418 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-211ENST00000554437 ZNF628Q5EBL2 1059 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 BMP2KLQ5H9B9 411 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 GFI1BQ5VTD9 330 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 TEX38Q6PEX7 206 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 CARNMT1Q8N4J0 409 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 ARL6IP6Q8N6S5 226 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 SYT2Q8N9I0 419 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-211ENST00000554437 CNBD1Q8NA66 436 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 OR2T12Q8NG77 320 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 OR8H1Q8NGG4 311 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 OR2AJ1Q8NGZ0 328 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 PTERQ96BW5 349 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 TMCO6Q96DC7 493 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 FBXO17Q96EF6 278 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 GCNAQ96QF7 691 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 DESI2Q9BSY9 194 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 KLHL4Q9C0H6 718 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 PELI2Q9HAT8 420 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 CCDC177Q9NQR7 707 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-211ENST00000554437 WBP11Q9Y2W2 641 aaKnown RBP4.69□□□□□ -1.66
SCFD1-211ENST00000554437 PASKQ96RG2 1323 aa4.69□□□□□ -1.66
SCFD1-211ENST00000554437 OR6C76A6NM76 312 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 IPO8O15397 1037 aaKnown RBP4.68□□□□□ -1.66
SCFD1-211ENST00000554437 HTATSF1O43719 755 aaKnown RBP4.68□□□□□ -1.66
SCFD1-211ENST00000554437 HMMRO75330 724 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 ERAL1O75616 437 aaKnown RBP4.68□□□□□ -1.66
SCFD1-211ENST00000554437 INHBAP08476 426 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 TCEA1P23193 301 aaKnown RBP4.68□□□□□ -1.66
SCFD1-211ENST00000554437 NR1D2Q14995 579 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 TMEM211Q6ICI0 200 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 NAA16Q6N069 864 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-211ENST00000554437 RBMS3Q6XE24 437 aaKnown RBP4.68□□□□□ -1.66
SCFD1-211ENST00000554437 DNAJB7Q7Z6W7 309 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-211ENST00000554437 ADGRA1Q86SQ6 560 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 TRPT1Q86TN4 253 aaKnown RBP4.68□□□□□ -1.66
SCFD1-211ENST00000554437 PRPF39Q86UA1 669 aaKnown RBP4.68□□□□□ -1.66
SCFD1-211ENST00000554437 ADIPOR2Q86V24 386 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 LCA5Q86VQ0 697 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 TMEM173Q86WV6 379 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-211ENST00000554437 ERC1Q8IUD2 1116 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 PLD3Q8IV08 490 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 FAM114A1Q8IWE2 563 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 AVL9Q8NBF6 648 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 PAPD5Q8NDF8 572 aaKnown RBP4.68□□□□□ -1.66
SCFD1-211ENST00000554437 FCAMRQ8WWV6 532 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 ZNF524Q96C55 264 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 SPAG5Q96R06 1193 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 ABHD1Q96SE0 405 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 TRAF4Q9BUZ4 470 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-211ENST00000554437 APOL6Q9BWW8 343 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 OR10A4Q9H209 315 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 DPAGT1Q9H3H5 408 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 ACKR4Q9NPB9 350 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 ECHDC1Q9NTX5 307 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 FLT1P17948 1338 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 ZNF541Q9H0D2 1346 aa4.68□□□□□ -1.66
SCFD1-211ENST00000554437 PLOD2O00469 737 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 SH2B2O14492 632 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-211ENST00000554437 CLIC2O15247 247 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 ADAM20O43506 726 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 KRT86O43790 486 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 TSPAN1O60635 241 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 SOCS5O75159 536 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 MED24O75448 989 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 TSHBP01222 138 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 SCG2P13521 617 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 LIG4P49917 911 aa4.67□□□□□ -1.66
SCFD1-211ENST00000554437 CDH11P55287 796 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms