RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ZBTB2Q8N680 514 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 ENDOVQ8N8Q3 282 aaKnown RBP7.1□□□□□ -1.27
ATXN3-219ENST00000553488 GPR26Q8NDV2 337 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 NEK11Q8NG66 645 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 FAM71BQ8TC56 605 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 NSMCE1Q8WV22 266 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 MR1Q95460 341 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 FATE1Q969F0 183 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 GLYATL1Q969I3 302 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 ZNF501Q96CX3 271 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-219ENST00000553488 HRASLS5Q96KN8 279 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 ERGIC2Q96RQ1 377 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 MAP3K3Q99759 626 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 ZSCAN5AQ9BUG6 496 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 TUBB2BQ9BVA1 445 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 NUP85Q9BW27 656 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 CHST8Q9H2A9 424 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 TRIM39Q9HCM9 518 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 FGF21Q9NSA1 209 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 GPR83Q9NYM4 423 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 AMACRQ9UHK6 382 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 TMPRSS11EQ9UL52 423 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 NTNG1Q9Y2I2 539 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 KRTAP9-6A0A140TA67 174 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 ANKUB1A6NFN9 424 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 TMCO5BA8MYB1 307 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 E2F3O00716 465 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 ZNF185O15231 689 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 MATN3O15232 486 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 MTX2O75431 263 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 SCRG1O75711 98 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 SLC25A14O95258 325 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-219ENST00000553488 PGRP06401 933 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 CD48P09326 243 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 RAB40ALP0C0E4 278 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 FERP16591 822 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 ZNF16P17020 682 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-219ENST00000553488 CD96P40200 585 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 VAV2P52735 878 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 PWP1Q13610 501 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 ATP1A4Q13733 1029 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 GPR19Q15760 415 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 PLEKHN1Q494U1 663 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-219ENST00000553488 BOLA3Q53S33 107 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 ANKRD20A8PQ5CZ79 823 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 ZNF789Q5FWF6 425 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 CT47A1Q5JQC4 288 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-219ENST00000553488 PLEKHS1Q5SXH7 462 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 VWA5B1Q5TIE3 1220 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 PRAMEF17Q5VTA0 474 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 ALS2CLQ60I27 953 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 E4F1Q66K89 784 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-219ENST00000553488 NCBP2-AS2Q69YL0 99 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 PDPK2PQ6A1A2 396 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 PPP1R2P3Q6NXS1 205 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 LETMD1Q6P1Q0 360 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 MED25Q71SY5 747 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 APTXQ7Z2E3 356 aaKnown RBP7.09□□□□□ -1.27
ATXN3-219ENST00000553488 TMEM126BQ8IUX1 230 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 LRRC49Q8IUZ0 686 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.09□□□□□ -1.27
ATXN3-219ENST00000553488 ENOX1Q8TC92 643 aaKnown RBP7.09□□□□□ -1.27
ATXN3-219ENST00000553488 TEKT4Q8WW24 435 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 HSPH1Q92598 858 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 CXorf40BQ96DE9 158 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 TRIB3Q96RU7 358 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 CD180Q99467 661 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 MIPEPQ99797 713 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 KRTAP4-12Q9BQ66 201 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 SPATA16Q9BXB7 569 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 NLNQ9BYT8 704 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 C5AR2Q9P296 337 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 TCFL5Q9UL49 500 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 SNX7Q9UNH6 387 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 ENTPD4Q9Y227 616 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 BTRCQ9Y297 605 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 CORINQ9Y5Q5 1042 aa7.09□□□□□ -1.27
ATXN3-219ENST00000553488 NIPBLQ6KC79 2804 aaeCLIP7.09□□□□□ -1.28
ATXN3-219ENST00000553488 NCOA6Q14686 2063 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-219ENST00000553488 OR5K3A6NET4 321 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 A6NL46 340 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 ANKRD66B4E2M5 251 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 HNRNPRO43390 633 aaKnown RBP7.08□□□□□ -1.28
ATXN3-219ENST00000553488 VEGFDO43915 354 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 IDSP22304 550 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 CA4P22748 312 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 HNRNPH3P31942 346 aaKnown RBP7.08□□□□□ -1.28
ATXN3-219ENST00000553488 CD86P42081 329 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 ZNF165P49910 485 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 ARSEP51690 589 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 CLCN7P51798 805 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 GSDMDP57764 484 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 HSD11B2P80365 405 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 ITKQ08881 620 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 DMPKQ09013 629 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 RAPSNQ13702 412 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 GALNT3Q14435 633 aa7.08□□□□□ -1.28
ATXN3-219ENST00000553488 PAFAH1B3Q15102 231 aaKnown RBP7.08□□□□□ -1.28
ATXN3-219ENST00000553488 DNTTIP2Q5QJE6 756 aaKnown RBP7.08□□□□□ -1.28
ATXN3-219ENST00000553488 TIGD7Q6NT04 549 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms