RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 NUP85Q9BW27 656 aa11.96□□□□□ -0.49
SNRPF-204ENST00000552085 RNF32Q9H0A6 362 aa11.96□□□□□ -0.49
SNRPF-204ENST00000552085 TSPAN10Q9H1Z9 355 aaPredicted RBP11.96□□□□□ -0.49
SNRPF-204ENST00000552085 SAMSN1Q9NSI8 373 aaKnown RBP11.96□□□□□ -0.49
SNRPF-204ENST00000552085 NPIPA1Q9UND3 350 aa11.96□□□□□ -0.49
SNRPF-204ENST00000552085 TCRBV5S1A1TA0A578 114 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 ZSCAN9O15535 394 aaPredicted RBP11.95□□□□□ -0.5
SNRPF-204ENST00000552085 ZNHIT1O43257 154 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 ALBP02768 609 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 RAF1P04049 648 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 PRR35P0CG20 571 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 DESP17661 470 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 FDXRP22570 491 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 ALDH6A1Q02252 535 aaKnown RBP11.95□□□□□ -0.5
SNRPF-204ENST00000552085 OLIG2Q13516 323 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 NKG7Q16617 165 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 PPP1R15BQ5SWA1 713 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 MARC1Q5VT66 337 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 NAPRTQ6XQN6 538 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 FAM83HQ6ZRV2 1179 aaPredicted RBP11.95□□□□□ -0.5
SNRPF-204ENST00000552085 CEP128Q6ZU80 1094 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 RFX8Q6ZV50 586 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 OVCH1Q7RTY7 1134 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 KRTAP1-3Q8IUG1 177 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 CLYBLQ8N0X4 340 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 TRAM1L1Q8N609 369 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 ZNF655Q8N720 491 aaPredicted RBP11.95□□□□□ -0.5
SNRPF-204ENST00000552085 GPR26Q8NDV2 337 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 COX4I2Q96KJ9 171 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 INSM2Q96T92 566 aaPredicted RBP11.95□□□□□ -0.5
SNRPF-204ENST00000552085 RASSF1Q9NS23 344 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 FANCLQ9NW38 375 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 AP4E1Q9UPM8 1137 aa11.95□□□□□ -0.5
SNRPF-204ENST00000552085 PHF3Q92576 2039 aaKnown RBP11.94□□□□□ -0.5
SNRPF-204ENST00000552085 OR5H15A6NDH6 313 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 HCRTR1O43613 425 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 KLK8O60259 260 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 GFPT2O94808 682 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 PRLP01236 227 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 UQCRHP07919 91 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 HCAR3P49019 387 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 ZNF135P52742 658 aaPredicted RBP11.94□□□□□ -0.5
SNRPF-204ENST00000552085 DCDC1P59894 354 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 GTF2H3Q13889 308 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 TPD52L1Q16890 204 aaPredicted RBP11.94□□□□□ -0.5
SNRPF-204ENST00000552085 SLC5A12Q1EHB4 618 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 DEFB110Q30KQ9 67 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 HIBCHQ6NVY1 386 aaPredicted RBP11.94□□□□□ -0.5
SNRPF-204ENST00000552085 TLDC1Q6P9B6 456 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 SHISA6Q6ZSJ9 500 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 CHSY3Q70JA7 882 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 CDC20BQ86Y33 519 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 ZZZ3Q8IYH5 903 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 MLKLQ8NB16 471 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 SIMC1Q8NDZ2 872 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 LPCAT1Q8NF37 534 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 NSMCE1Q8WV22 266 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 C12orf66Q96MD2 445 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 TDRD1Q9BXT4 1180 aaKnown RBP11.94□□□□□ -0.5
SNRPF-204ENST00000552085 SLC26A1Q9H2B4 701 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 DHX35Q9H5Z1 703 aaKnown RBP11.94□□□□□ -0.5
SNRPF-204ENST00000552085 SOX17Q9H6I2 414 aaPredicted RBP11.94□□□□□ -0.5
SNRPF-204ENST00000552085 FAM60AQ9NP50 221 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 NT5MQ9NPB1 228 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 RNF6Q9Y252 685 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 L3MBTL1Q9Y468 752 aa11.94□□□□□ -0.5
SNRPF-204ENST00000552085 MAP2K7O14733 419 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 ASNA1O43681 348 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 MAFKO60675 156 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 POP7O75817 140 aaKnown RBP11.93□□□□□ -0.5
SNRPF-204ENST00000552085 ATE1O95260 518 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 BMP10O95393 424 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 PIM1P11309 404 aaPredicted RBP11.93□□□□□ -0.5
SNRPF-204ENST00000552085 ACPPP15309 386 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 ITGAXP20702 1163 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 SOX5P35711 763 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 JAM2P57087 298 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 RPL26P61254 145 aaKnown RBP11.93□□□□□ -0.5
SNRPF-204ENST00000552085 RPL7AP62424 266 aaKnown RBP11.93□□□□□ -0.5
SNRPF-204ENST00000552085 TMPRSS15P98073 1019 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 ITKQ08881 620 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 TMEM115Q12893 351 aaPredicted RBP11.93□□□□□ -0.5
SNRPF-204ENST00000552085 NFE2L1Q14494 772 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 IHHQ14623 411 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 CAMK4Q16566 473 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 CA9Q16790 459 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 CLEC16AQ2KHT3 1053 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 ZNF766Q5HY98 468 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 ERMARDQ5T6L9 678 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 SHEQ5VZ18 495 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 DNAJC24Q6P3W2 148 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 MON1BQ7L1V2 547 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 PSTKQ8IV42 348 aaKnown RBP11.93□□□□□ -0.5
SNRPF-204ENST00000552085 CHERPQ8IWX8 916 aaKnown RBP11.93□□□□□ -0.5
SNRPF-204ENST00000552085 GHDCQ8N2G8 530 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 MARVELD2Q8N4S9 558 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 CPSF7Q8N684 471 aaKnown RBP11.93□□□□□ -0.5
SNRPF-204ENST00000552085 HDAC10Q969S8 669 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 EID2BQ96D98 161 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 MCEEQ96PE7 176 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms