RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ABHD14AQ9BUJ0 271 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 DUSP26Q9BV47 211 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 TRIM31Q9BZY9 425 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 TOR3AQ9H497 397 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 STN1Q9H668 368 aaKnown RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 APOBEC3GQ9HC16 384 aaKnown RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 CPNE5Q9HCH3 593 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ASCL3Q9NQ33 180 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 SPHK2Q9NRA0 654 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ASNSD1Q9NWL6 643 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 PPP1R14DQ9NXH3 145 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 SH3BP4Q9P0V3 963 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 SEMA5BQ9P283 1151 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 AASSQ9UDR5 926 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 SERGEFQ9UGK8 458 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 HMGXB4Q9UGU5 601 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 PACSIN3Q9UKS6 424 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 RAB23Q9ULC3 237 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 HSF4Q9ULV5 492 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 SLC8A2Q9UPR5 921 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 CPQQ9Y646 472 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 SIRT4Q9Y6E7 314 aaPredicted RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 SCINQ9Y6U3 715 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 NUP210Q8TEM1 1887 aaPredicted RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 MYO16Q9Y6X6 1858 aa2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ATXN2Q99700 1313 aaKnown RBP2.41□□□□□ -2.02
CPSF6-207ENST00000551516 ADGRG4Q8IZF6 3080 aa2.4□□□□□ -2.02
CPSF6-207ENST00000551516 TDRD15B5MCY1 1934 aaKnown RBP2.4□□□□□ -2.02
CPSF6-207ENST00000551516 DENND4CQ5VZ89 1909 aa2.4□□□□□ -2.02
CPSF6-207ENST00000551516 COL5A1P20908 1838 aaPredicted RBP2.4□□□□□ -2.02
CPSF6-207ENST00000551516 DOPEY1Q5JWR5 2465 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 HIVEP1P15822 2718 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 A0A087X0M5 115 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 TRAV19A0A0A6YYK7 116 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 GOLGA6L10A0A0M3HER8 536 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 A0A1B0GTQ1 180 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 A0A1B0GX30 115 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 A0A1W2PPH5 198 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 GRID2IPA4D2P6 1211 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 NPIPB13A6NJU9 1138 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 NPIPB5A8MRT5 1133 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 NPIPB4C9JG80 1138 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 E9PAM4 449 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 POC1B-GALNT4F8VUJ3 575 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 PRYO14603 147 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 CPLX1O14810 134 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 DSCR3O14972 297 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 SPTLC2O15270 562 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 EIF5BO60841 1220 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 USP12O75317 370 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 CNTN5O94779 1100 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 METTL18O95568 372 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 HLA-DQA2P01906 255 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 HSP90AA1P07900 732 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 CCDC192P0DO97 292 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 ODC1P11926 461 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 PKMP14618 531 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 HOXB9P17482 250 aaPredicted RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 TGM2P21980 687 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 BDNFP23560 247 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 NDUFS1P28331 727 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 TACR3P29371 465 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 HLA-FP30511 346 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 ACSL1P33121 698 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 DRD3P35462 400 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 AVPR1AP37288 418 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 PPP3CCP48454 512 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 LHX1P48742 406 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 CSNK1EP49674 416 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 ACADVLP49748 655 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF84P51523 738 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 TPMTP51580 245 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 SGSHP51688 502 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 PDX1P52945 283 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 METAP1P53582 386 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 CLNS1AP54105 237 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 ADPRHP54922 357 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 CDH8P55286 799 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 CDH15P55291 814 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 TAS2R38P59533 333 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 RPL10AP62906 217 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 INCA1Q0VD86 236 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 GALNT2Q10471 571 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 BYSLQ13895 437 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 HNRNPDQ14103 355 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 PDE1CQ14123 709 aaPredicted RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 NAA25Q14CX7 972 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 PSMD6Q15008 389 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 LARS2Q15031 903 aaKnown RBP2.4□□□□□ -2.03
CPSF6-207ENST00000551516 SEC23BQ15437 767 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 KYAT1Q16773 422 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 HLA-BQ31612 363 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 GXYLT1Q4G148 440 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 ZCWPW2Q504Y3 356 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 FAM69AQ5T7M9 428 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 DAB2IPQ5VWQ8 1189 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 LYSMD4Q5XG99 296 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 HAUS3Q68CZ6 603 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 CRYBG3Q68DQ2 2970 aa2.4□□□□□ -2.03
CPSF6-207ENST00000551516 SUMO4Q6EEV6 95 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms