RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 MAP9Q49MG5 647 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 PPM1JQ5JR12 505 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 UNC5DQ6UXZ4 953 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 TDRPQ86YL5 185 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 IQCKQ8N0W5 287 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 Q8N9G6 341 aaPredicted RBP12.7□□□□□ -0.38
RAB5C-206ENST00000550406 OR6C4Q8NGE1 309 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 HNRNPLLQ8WVV9 542 aaKnown RBP12.7□□□□□ -0.38
RAB5C-206ENST00000550406 ASB11Q8WXH4 323 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 LINGO1Q96FE5 620 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 PDLIM5Q96HC4 596 aaKnown RBP12.7□□□□□ -0.38
RAB5C-206ENST00000550406 UBXN10Q96LJ8 280 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 CCDC3Q9BQI4 270 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 MENTQ9BUN1 341 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 SLC32A1Q9H598 525 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 MVB12BQ9H7P6 319 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 UCK1Q9HA47 277 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 GPAMQ9HCL2 828 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 POT1Q9NUX5 634 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 OGFRQ9NZT2 677 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 PLAAQ9Y263 795 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 ASF1AQ9Y294 204 aa12.7□□□□□ -0.38
RAB5C-206ENST00000550406 IGHV1OR21-1A0A087WYE8 117 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 A0A1W2PQM1 296 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 ARHGEF33A8MVX0 844 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 RFPL1O75677 317 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 C2P06681 752 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 SNRPAP09012 282 aaKnown RBP12.69□□□□□ -0.38
RAB5C-206ENST00000550406 H2AFXP16104 143 aaPredicted RBP12.69□□□□□ -0.38
RAB5C-206ENST00000550406 BDKRB1P46663 353 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 SLCO1A2P46721 670 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 NOVA1P51513 510 aaKnown RBP12.69□□□□□ -0.38
RAB5C-206ENST00000550406 IL2P60568 153 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 IRF9Q00978 393 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.69□□□□□ -0.38
RAB5C-206ENST00000550406 TIFABQ6ZNK6 161 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 SPRED1Q7Z699 444 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 TRIM48Q8IWZ4 208 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 TBC1D21Q8IYX1 336 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 SPATA6LQ8N4H0 392 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 LMNTD1Q8N9Z9 388 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 OR52E1Q8NGJ3 308 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 OR5K2Q8NHB8 316 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 ZFPM2Q8WW38 1151 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 NAT6Q93015 286 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 TSPAN17Q96FV3 270 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 CCDC77Q9BR77 488 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 HGH1Q9BTY7 390 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 UNKQ9C0B0 810 aaKnown RBP12.69□□□□□ -0.38
RAB5C-206ENST00000550406 KIR3DX1Q9H7L2 352 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 SNX15Q9NRS6 342 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 IGSF5Q9NSI5 407 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.69□□□□□ -0.38
RAB5C-206ENST00000550406 PSMC3IPQ9P2W1 217 aaPredicted RBP12.69□□□□□ -0.38
RAB5C-206ENST00000550406 CIDEBQ9UHD4 219 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 PLAGL1Q9UM63 463 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 HEBP2Q9Y5Z4 205 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 IKBKGQ9Y6K9 419 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 COLEC10Q9Y6Z7 277 aa12.69□□□□□ -0.38
RAB5C-206ENST00000550406 CFAP54Q96N23 3096 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 A0A1W2PPM1 405 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 LILRA5A6NI73 299 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 SMIM23A6NLE4 172 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 CDC7O00311 574 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 NTN3O00634 580 aaPredicted RBP12.68□□□□□ -0.38
RAB5C-206ENST00000550406 ERLIN1O75477 346 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 KRT38O76015 456 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 GP1BAP07359 652 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 FTH1P19P0C7X4 201 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 CCDC166P0CW27 439 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 CNTFP26441 200 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 CD1CP29017 333 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 CRABP2P29373 138 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 ALDH4A1P30038 563 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 GPR3P46089 330 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 KCNC1P48547 511 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 RGS4P49798 205 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 SLC12A2P55011 1212 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 RASA2Q15283 850 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 NKAIN2Q5VXU1 208 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 SH2D5Q6ZV89 423 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 TMPRSS9Q7Z410 1059 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 RBM12BQ8IXT5 1001 aaKnown RBP12.68□□□□□ -0.38
RAB5C-206ENST00000550406 CENPLQ8N0S6 344 aaPredicted RBP12.68□□□□□ -0.38
RAB5C-206ENST00000550406 PLD6Q8N2A8 252 aaKnown RBP12.68□□□□□ -0.38
RAB5C-206ENST00000550406 NKAPQ8N5F7 415 aaKnown RBP12.68□□□□□ -0.38
RAB5C-206ENST00000550406 AVL9Q8NBF6 648 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 SKA2Q8WVK7 121 aaPredicted RBP12.68□□□□□ -0.38
RAB5C-206ENST00000550406 SH3KBP1Q96B97 665 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 ZIM3Q96PE6 472 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 SLC38A3Q99624 504 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 TMEM109Q9BVC6 243 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 TWSG1Q9GZX9 223 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 TRIT1Q9H3H1 467 aaKnown RBP12.68□□□□□ -0.38
RAB5C-206ENST00000550406 LRRN3Q9H3W5 708 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 TFB2MQ9H5Q4 396 aaKnown RBP12.68□□□□□ -0.38
RAB5C-206ENST00000550406 XKR8Q9H6D3 395 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 SYTL2Q9HCH5 934 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 TBK1Q9UHD2 729 aa12.68□□□□□ -0.38
RAB5C-206ENST00000550406 ICKQ9UPZ9 632 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms