RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 UGT1A4P22310 534 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 CBSP35520 551 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 FOLR3P41439 243 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 PRKAA1Q13131 559 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 C1orf189Q5VU69 101 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 METRNLQ641Q3 311 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 B4GALNT4Q76KP1 1039 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 PPP1R32Q7Z5V6 425 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 CPNE8Q86YQ8 564 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 TMEM151BQ8IW70 566 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 PQLC3Q8N755 202 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 OR4E2Q8NGC2 313 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 SPATA22Q8NHS9 363 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 ZFPM2Q8WW38 1151 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 IMP4Q96G21 291 aaKnown RBP10.16□□□□□ -0.78
VPS29-208ENST00000550267 TRAPPC9Q96Q05 1148 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 DPH2Q9BQC3 489 aaPredicted RBP10.16□□□□□ -0.78
VPS29-208ENST00000550267 KLHL25Q9H0H3 589 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 ISCUQ9H1K1 167 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 UGT1A7Q9HAW7 530 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 UGT1A10Q9HAW8 530 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 UGT1A8Q9HAW9 530 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 CBX8Q9HC52 389 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 SYTL2Q9HCH5 934 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 IP6K2Q9UHH9 426 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 SERTAD3Q9UJW9 196 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 ANAPC7Q9UJX3 599 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 MYO6Q9UM54 1294 aa10.16□□□□□ -0.78
VPS29-208ENST00000550267 PDZD2O15018 2839 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 A0A1B0GUH1 482 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 LRRC10BA6NIK2 292 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 CNOT3O75175 753 aaKnown RBP10.15□□□□□ -0.78
VPS29-208ENST00000550267 ALBP02768 609 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 SNRPB2P08579 225 aaKnown RBP10.15□□□□□ -0.78
VPS29-208ENST00000550267 STSP08842 583 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 HBQ1P09105 142 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 MSL3P1P0C860 447 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 SKILP12757 684 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 NID1P14543 1247 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 PVRP15151 417 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 CDK11BP21127 795 aaKnown RBP10.15□□□□□ -0.78
VPS29-208ENST00000550267 PRDX3P30048 256 aaKnown RBP10.15□□□□□ -0.78
VPS29-208ENST00000550267 PRKCIP41743 596 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 SOX8P57073 446 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 IFI35P80217 286 aaPredicted RBP10.15□□□□□ -0.78
VPS29-208ENST00000550267 PPIDQ08752 370 aaKnown RBP10.15□□□□□ -0.78
VPS29-208ENST00000550267 NOMO1Q15155 1222 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 HADHQ16836 314 aaKnown RBP10.15□□□□□ -0.78
VPS29-208ENST00000550267 LDLRAP1Q5SW96 308 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 FNBP1LQ5T0N5 605 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 GPRC6AQ5T6X5 926 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 FAM151BQ6UXP7 276 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 DET1Q7L5Y6 550 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 GDF7Q7Z4P5 450 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 NT5DC3Q86UY8 548 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 KCTD6Q8NC69 237 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 DDHD1Q8NEL9 900 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 PPP4R1Q8TF05 950 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 NAT14Q8WUY8 206 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 FAR1Q8WVX9 515 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 TADA1Q96BN2 335 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 AGAP3Q96P47 875 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 NRTNQ99748 197 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 ZNF670Q9BS34 389 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 XPO4Q9C0E2 1151 aaKnown RBP10.15□□□□□ -0.78
VPS29-208ENST00000550267 THAP2Q9H0W7 228 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 IL26Q9NPH9 171 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 GPN3Q9UHW5 284 aaPredicted RBP10.15□□□□□ -0.78
VPS29-208ENST00000550267 ZNF232Q9UNY5 417 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 CDYLQ9Y232 598 aa10.15□□□□□ -0.78
VPS29-208ENST00000550267 RP1L1Q8IWN7 2480 aaPredicted RBP10.15□□□□□ -0.78
VPS29-208ENST00000550267 APCP25054 2843 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 SCO2A0A1W2PP80 73 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 SERTM1A2A2V5 107 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 MGAT4DA6NG13 374 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 FAM229AH3BQW9 127 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 BTN3A3O00478 584 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 BTN3A1O00481 513 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 ALOX12BO75342 701 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 NDST3O95803 873 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 MT-CYBP00156 380 aaPredicted RBP10.14□□□□□ -0.79
VPS29-208ENST00000550267 UMODP07911 640 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 SLC35G4P0C7Q5 338 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 NDUFS1P28331 727 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 SPAM1P38567 509 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 TSFMP43897 325 aaKnown RBP10.14□□□□□ -0.79
VPS29-208ENST00000550267 MYL5Q02045 173 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 KLHL30Q0D2K2 578 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 CDC16Q13042 620 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 ART3Q13508 389 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 KRT33BQ14525 404 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 SLC9A5Q14940 896 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 PPP2R5EQ16537 467 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 CYP2A13Q16696 494 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 ZFYVE27Q5T4F4 411 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 C20orf204Q6ZNR8 217 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 CDHR3Q6ZTQ4 885 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 LILRA3Q8N6C8 439 aaPredicted RBP10.14□□□□□ -0.79
VPS29-208ENST00000550267 OR2Y1Q8NGV0 311 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 DNAJB14Q8TBM8 379 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms