RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 PVRP15151 417 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 ST6GAL1P15907 406 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 RPL22P35268 128 aaKnown RBP15.84■□□□□ 0.13
VPS29-207ENST00000549970 CSE1LP55060 971 aaKnown RBP15.84■□□□□ 0.13
VPS29-207ENST00000549970 RPS18P62269 152 aaKnown RBP15.84■□□□□ 0.13
VPS29-207ENST00000549970 PRAMEP78395 509 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 GPS2Q13227 327 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 LYPLAL1Q5VWZ2 237 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 ADGRF3Q8IZF5 1079 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 PPHLN1Q8NEY8 458 aaKnown RBP15.84■□□□□ 0.13
VPS29-207ENST00000549970 OR4L1Q8NH43 312 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 OR8K5Q8NH50 307 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 MR1Q95460 341 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 ABHD17AQ96GS6 310 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 TTC1Q99614 292 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 ACTL8Q9H568 366 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 ACTR10Q9NZ32 417 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 ICKQ9UPZ9 632 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 POLHQ9Y253 713 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 TCAF1Q9Y4C2 921 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 KCNMB2Q9Y691 235 aa15.84■□□□□ 0.13
VPS29-207ENST00000549970 SLC5A10A0PJK1 596 aa15.83■□□□□ 0.12
VPS29-207ENST00000549970 TMEM150CB9EJG8 249 aa15.83■□□□□ 0.12
VPS29-207ENST00000549970 ACADLP28330 430 aa15.83■□□□□ 0.12
VPS29-207ENST00000549970 SESN2P58004 480 aaPredicted RBP15.83■□□□□ 0.12
VPS29-207ENST00000549970 BASP1P80723 227 aaKnown RBP15.83■□□□□ 0.12
VPS29-207ENST00000549970 KCNC4Q03721 635 aa15.83■□□□□ 0.12
VPS29-207ENST00000549970 ACVR1Q04771 509 aa15.83■□□□□ 0.12
VPS29-207ENST00000549970 ABRQ12979 859 aa15.83■□□□□ 0.12
VPS29-207ENST00000549970 SEMA3AQ14563 771 aa15.83■□□□□ 0.12
VPS29-207ENST00000549970 CCNG2Q16589 344 aa15.83■□□□□ 0.12
VPS29-207ENST00000549970 FASTKD1Q53R41 847 aaKnown RBP15.83■□□□□ 0.12
VPS29-207ENST00000549970 ZNF534Q76KX8 674 aa15.83■□□□□ 0.12
VPS29-207ENST00000549970 NLRP9Q7RTR0 991 aa15.83■□□□□ 0.12
VPS29-207ENST00000549970 SLC38A9Q8NBW4 561 aa15.83■□□□□ 0.12
VPS29-207ENST00000549970 PITPNM3Q9BZ71 974 aa15.83■□□□□ 0.12
VPS29-207ENST00000549970 LATS2Q9NRM7 1088 aa15.83■□□□□ 0.12
VPS29-207ENST00000549970 RIMKLBQ9ULI2 386 aa15.83■□□□□ 0.12
VPS29-207ENST00000549970 TDRKHQ9Y2W6 561 aaKnown RBP15.83■□□□□ 0.12
VPS29-207ENST00000549970 MAP3K7O43318 606 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 FGGP02679 453 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 PTPN4P29074 926 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 RPS15P62841 145 aaKnown RBP15.82■□□□□ 0.12
VPS29-207ENST00000549970 SPESP1Q6UW49 350 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 UNC5AQ6ZN44 842 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 GSTA5Q7RTV2 222 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 LDB1Q86U70 411 aaPredicted RBP15.82■□□□□ 0.12
VPS29-207ENST00000549970 TRIM73Q86UV7 250 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 HOOK3Q86VS8 718 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 TBC1D21Q8IYX1 336 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 OR1L3Q8NH93 324 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 CPT1BQ92523 772 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 CLIP3Q96DZ5 547 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 TRAPPC9Q96Q05 1148 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 GPR87Q9BY21 358 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 CHST8Q9H2A9 424 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 CLMPQ9H6B4 373 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 PLAGL1Q9UM63 463 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 MAN2B2Q9Y2E5 1009 aa15.82■□□□□ 0.12
VPS29-207ENST00000549970 SPENQ96T58 3664 aaKnown RBP15.82■□□□□ 0.12
VPS29-207ENST00000549970 BHMG1C9JSJ3 638 aaPredicted RBP15.81■□□□□ 0.12
VPS29-207ENST00000549970 F8W8V4 182 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 KLK3P07288 261 aaPredicted RBP15.81■□□□□ 0.12
VPS29-207ENST00000549970 CYP2A7P20853 494 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 SHMT2P34897 504 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 PPARGP37231 505 aaPredicted RBP15.81■□□□□ 0.12
VPS29-207ENST00000549970 KCNJ1P48048 391 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 CRADDP78560 199 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 PLOD1Q02809 727 aaPredicted RBP15.81■□□□□ 0.12
VPS29-207ENST00000549970 TLE1Q04724 770 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 KCTD19Q17RG1 926 aaPredicted RBP15.81■□□□□ 0.12
VPS29-207ENST00000549970 LACTB2Q53H82 288 aaPredicted RBP15.81■□□□□ 0.12
VPS29-207ENST00000549970 PCID2Q5JVF3 399 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 DRICH1Q6PGQ1 229 aaPredicted RBP15.81■□□□□ 0.12
VPS29-207ENST00000549970 ZNF662Q6ZS27 426 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 LRRC8AQ8IWT6 810 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 TRIM58Q8NG06 486 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 OR5K2Q8NHB8 316 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 LKAAEAR1Q8TD35 194 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 ACTR5Q9H9F9 607 aaPredicted RBP15.81■□□□□ 0.12
VPS29-207ENST00000549970 SYTL2Q9HCH5 934 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 EIF2B3Q9NR50 452 aaKnown RBP15.81■□□□□ 0.12
VPS29-207ENST00000549970 CHRAC1Q9NRG0 131 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 CATSPERZQ9NTU4 200 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 POLG2Q9UHN1 485 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 ANAPC5Q9UJX4 755 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 DRG1Q9Y295 367 aaKnown RBP15.81■□□□□ 0.12
VPS29-207ENST00000549970 TP53TG5Q9Y2B4 290 aa15.81■□□□□ 0.12
VPS29-207ENST00000549970 IQCF5A8MTL0 148 aa15.8■□□□□ 0.12
VPS29-207ENST00000549970 MEN1O00255 615 aa15.8■□□□□ 0.12
VPS29-207ENST00000549970 CEP104O60308 925 aa15.8■□□□□ 0.12
VPS29-207ENST00000549970 RFPL1O75677 317 aa15.8■□□□□ 0.12
VPS29-207ENST00000549970 RECKO95980 971 aa15.8■□□□□ 0.12
VPS29-207ENST00000549970 CHRM5P08912 532 aaPredicted RBP15.8■□□□□ 0.12
VPS29-207ENST00000549970 TPBGLP0DKB5 382 aa15.8■□□□□ 0.12
VPS29-207ENST00000549970 UGT2B7P16662 529 aa15.8■□□□□ 0.12
VPS29-207ENST00000549970 NR1D1P20393 614 aa15.8■□□□□ 0.12
VPS29-207ENST00000549970 CCR7P32248 378 aa15.8■□□□□ 0.12
VPS29-207ENST00000549970 CXCR5P32302 372 aa15.8■□□□□ 0.12
VPS29-207ENST00000549970 CSRP3P50461 194 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms