RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 ACY1Q03154 408 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 MSLNQ13421 630 aaPredicted RBP11.85□□□□□ -0.51
DDX54-206ENST00000549271 OLIG2Q13516 323 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 ATP1A4Q13733 1029 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 RPE65Q16518 533 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 METRNLQ641Q3 311 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 LCN10Q6JVE6 187 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 IRGCQ6NXR0 463 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 RANBP10Q6VN20 620 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 KLHDC8BQ8IXV7 354 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 CARFQ8N187 725 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 RASGEF1AQ8N9B8 481 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 CCDC110Q8TBZ0 833 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 LRFN5Q96NI6 719 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 NLNQ9BYT8 704 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 FGF21Q9NSA1 209 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 SMOXQ9NWM0 555 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 R3HDM2Q9Y2K5 976 aaKnown RBP11.85□□□□□ -0.51
DDX54-206ENST00000549271 PCM1Q15154 2024 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 CCDC88CQ9P219 2028 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 A0A1B0GUH1 482 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 C5orf60A6NFR6 353 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 GOLGA6L6A8MZA4 724 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 GAPDHSO14556 408 aaPredicted RBP11.84□□□□□ -0.51
DDX54-206ENST00000549271 BUD23O43709 281 aaKnown RBP11.84□□□□□ -0.51
DDX54-206ENST00000549271 SCRG1O75711 98 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 ANXA9O76027 345 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 EBLN1P0CF75 366 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 EDN3P14138 238 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 CA5AP35218 305 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 CTSCP53634 463 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 PPP1CAP62136 330 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 ITGA9Q13797 1035 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 PTPRCAPQ14761 206 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 MYBPC3Q14896 1274 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 ITPRIPL1Q6GPH6 555 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 DENND5AQ6IQ26 1287 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 CERS6Q6ZMG9 384 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 FJX1Q86VR8 437 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 ZNF295-AS1Q8N0V1 137 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 D2HGDHQ8N465 521 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 BEND7Q8N7W2 519 aaPredicted RBP11.84□□□□□ -0.51
DDX54-206ENST00000549271 GPR150Q8NGU9 434 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 OR8K5Q8NH50 307 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 GDAP1Q8TB36 358 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 SLC35B2Q8TB61 432 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 BLOC1S5Q8TDH9 187 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 ITLN2Q8WWU7 325 aaPredicted RBP11.84□□□□□ -0.51
DDX54-206ENST00000549271 SGSM3Q96HU1 749 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 SPATA13Q96N96 652 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 FICDQ9BVA6 458 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 ZNF552Q9H707 407 aaPredicted RBP11.84□□□□□ -0.51
DDX54-206ENST00000549271 LATS2Q9NRM7 1088 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 GUCA1BQ9UMX6 200 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 DOCK10Q96BY6 2186 aa11.84□□□□□ -0.51
DDX54-206ENST00000549271 CNTRLQ7Z7A1 2325 aa11.83□□□□□ -0.51
DDX54-206ENST00000549271 GLYATL1P3A0A0U1RQE8 302 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 OR5K3A6NET4 321 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 TLCD2A6NGC4 264 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 UGT1A9O60656 530 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 ALPPP05187 535 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 MTHFD1P11586 935 aaKnown RBP11.83□□□□□ -0.52
DDX54-206ENST00000549271 UGT1A6P19224 532 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 UGT1A1P22309 533 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 UGT1A4P22310 534 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 KYNUQ16719 465 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 PLEKHS1Q5SXH7 462 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 GPRC6AQ5T6X5 926 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 TMEM220Q6QAJ8 160 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 FAM83HQ6ZRV2 1179 aaPredicted RBP11.83□□□□□ -0.52
DDX54-206ENST00000549271 TMEM126BQ8IUX1 230 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 LRRC8AQ8IWT6 810 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 DSELQ8IZU8 1212 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 FAM71DQ8N9W8 422 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 RELTQ969Z4 430 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 ZNF501Q96CX3 271 aaPredicted RBP11.83□□□□□ -0.52
DDX54-206ENST00000549271 MAP3K3Q99759 626 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 APOL2Q9BQE5 337 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 FERMT1Q9BQL6 677 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 UGT1A7Q9HAW7 530 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 UGT1A10Q9HAW8 530 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 UGT1A8Q9HAW9 530 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 ACSL5Q9ULC5 683 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 AAR2Q9Y312 384 aaKnown RBP11.83□□□□□ -0.52
DDX54-206ENST00000549271 ZNF469Q96JG9 3925 aaPredicted RBP11.83□□□□□ -0.52
DDX54-206ENST00000549271 NUP210LQ5VU65 1888 aa11.83□□□□□ -0.52
DDX54-206ENST00000549271 GOLGA6L9A6NEM1 432 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 MGAT4DA6NG13 374 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 MEN1O00255 615 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 STK10O94804 968 aaKnown RBP11.82□□□□□ -0.52
DDX54-206ENST00000549271 IPO13O94829 963 aaKnown RBP11.82□□□□□ -0.52
DDX54-206ENST00000549271 METTL18O95568 372 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 KLK3P07288 261 aaPredicted RBP11.82□□□□□ -0.52
DDX54-206ENST00000549271 SNRPB2P08579 225 aaKnown RBP11.82□□□□□ -0.52
DDX54-206ENST00000549271 COX6B1P14854 86 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 RORAP35398 523 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 TNNT3P45378 269 aaPredicted RBP11.82□□□□□ -0.52
DDX54-206ENST00000549271 GDF10P55107 478 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 TUBB4BP68371 445 aa11.82□□□□□ -0.52
DDX54-206ENST00000549271 HSD11B2P80365 405 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms