RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 UGT2A3Q6UWM9 527 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 BTN2A1Q7KYR7 527 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 LHFPL3Q86UP9 236 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 KLHL36Q8N4N3 616 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 SRFBP1Q8NEF9 429 aaKnown RBP12.59□□□□□ -0.39
PTCH1-212ENST00000546744 OR8J3Q8NGG0 315 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 FCRL5Q96RD9 977 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 HEPHQ9BQS7 1158 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 COMMD3Q9UBI1 195 aa12.59□□□□□ -0.39
PTCH1-212ENST00000546744 DDX60Q8IY21 1712 aaKnown RBP12.59□□□□□ -0.39
PTCH1-212ENST00000546744 PRORSD1PA6NEY8 169 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 HIST1H2ABP04908 130 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 COL6A1P12109 1028 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 NCK1P16333 377 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 RPS3P23396 243 aaKnown RBP eCLIP12.58□□□□□ -0.39
PTCH1-212ENST00000546744 FMO3P31513 532 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 MAP2K3P46734 347 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 HCAR3P49019 387 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 GPR162Q16538 588 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 MEDAGQ5VYS4 303 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 HIST3H2AQ7L7L0 130 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 LGI2Q8N0V4 545 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 INO80EQ8NBZ0 244 aaPredicted RBP12.58□□□□□ -0.39
PTCH1-212ENST00000546744 PIGXQ8TBF5 258 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 ADAM32Q8TC27 787 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 HIST1H2ACQ93077 130 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 BIRC7Q96CA5 298 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 TOR3AQ9H497 397 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 INTS7Q9NVH2 962 aaKnown RBP12.58□□□□□ -0.39
PTCH1-212ENST00000546744 PCDHAC2Q9Y5I4 1007 aa12.58□□□□□ -0.39
PTCH1-212ENST00000546744 OR7A10O76100 309 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 IRF1P10914 325 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 FGF3P11487 239 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-212ENST00000546744 IFI30P13284 250 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 HSD17B1P14061 328 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 CYP3A5P20815 502 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 CFL1P23528 166 aaKnown RBP12.58□□□□□ -0.4
PTCH1-212ENST00000546744 VARSP26640 1264 aaKnown RBP12.58□□□□□ -0.4
PTCH1-212ENST00000546744 GDF10P55107 478 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 CDH12P55289 794 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 LAPTM5Q13571 262 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 ZNF234Q14588 700 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 BTBD16Q32M84 506 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 WDR45BQ5MNZ6 344 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 TRMT11Q7Z4G4 463 aaKnown RBP12.58□□□□□ -0.4
PTCH1-212ENST00000546744 ITIH5Q86UX2 942 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 TCF25Q9BQ70 676 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 HCN2Q9UL51 889 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 CICQ96RK0 1608 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-212ENST00000546744 SLC28A2O43868 658 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 VTNP04004 478 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 PTGER3P43115 390 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 STT3AP46977 705 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 FADDQ13158 208 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 PIGGQ5H8A4 983 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 SH3PXD2AQ5TCZ1 1133 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 LCN8Q6JVE9 175 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 CHPT1Q8WUD6 406 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 GEMIN6Q8WXD5 167 aaKnown RBP12.58□□□□□ -0.4
PTCH1-212ENST00000546744 APOLD1Q96LR9 279 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 SLC29A3Q9BZD2 475 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 TMEM39BQ9GZU3 492 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 MYOZ2Q9NPC6 264 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 ANKMY1Q9P2S6 941 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 STUB1Q9UNE7 303 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 RIIAD1A6NNX1 92 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 B8ZZF3 427 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 NME6O75414 186 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-212ENST00000546744 RFPL1O75677 317 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 OXSR1O95747 527 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-212ENST00000546744 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
PTCH1-212ENST00000546744 RHOQP17081 205 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 ITGB5P18084 799 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 PRKACBP22694 351 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 RFC2P35250 354 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 ARCN1P48444 511 aaKnown RBP12.58□□□□□ -0.4
PTCH1-212ENST00000546744 TMEM62Q0P6H9 643 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 KLF1Q13351 362 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-212ENST00000546744 FAM174BQ3ZCQ3 159 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 TMEM198Q66K66 360 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 ZNF613Q6PF04 617 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 SLC30A10Q6XR72 485 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 ABHD11Q8NFV4 315 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 OR10T2Q8NGX3 314 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 JPH3Q8WXH2 748 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-212ENST00000546744 PYURFQ96I23 114 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 DTLQ9NZJ0 730 aa12.58□□□□□ -0.4
PTCH1-212ENST00000546744 LRP5O75197 1615 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 BCORQ6W2J9 1755 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 NOBOXO60393 691 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 RECQL4O94761 1208 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 NPR2P20594 1047 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 S100A2P29034 98 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 PBX3P40426 434 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 RGS1Q08116 209 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 HSPA14Q0VDF9 509 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 GTF2H2Q13888 395 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 GRIK4Q16099 956 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 GPR153Q6NV75 609 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 GTF2H2CQ6P1K8 395 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms