RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 SEMA3BQ13214 749 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 AGMOQ6ZNB7 445 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 NECAB2Q7Z6G3 386 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 DENND1CQ8IV53 801 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 EID3Q8N140 333 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 DEPDC4Q8N2C3 294 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 RTL3Q8N8U3 475 aaKnown RBP14.39□□□□□ -0.11
HOXC11-202ENST00000546378 DTX3Q8N9I9 347 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 NETO1Q8TDF5 533 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 REXO5Q96IC2 774 aaKnown RBP14.39□□□□□ -0.11
HOXC11-202ENST00000546378 APOLD1Q96LR9 279 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 INPP5KQ9BT40 448 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 ASPSCR1Q9BZE9 553 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 PRKD2Q9BZL6 878 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 SLC25A51Q9H1U9 297 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 ARMC1Q9NVT9 282 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 POLR3BQ9NW08 1133 aaPredicted RBP14.39□□□□□ -0.11
HOXC11-202ENST00000546378 PAK1IP1Q9NWT1 392 aaPredicted RBP14.39□□□□□ -0.11
HOXC11-202ENST00000546378 MARCH2Q9P0N8 246 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 SSX4O60224 188 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 GPIP06744 558 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 BMP4P12644 408 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 CRHBPP24387 322 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 IGFBP5P24593 272 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 LEPRP48357 1165 aaKnown RBP14.39□□□□□ -0.11
HOXC11-202ENST00000546378 IL2P60568 153 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 EMX1Q04741 257 aaPredicted RBP14.39□□□□□ -0.11
HOXC11-202ENST00000546378 CRY1Q16526 586 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 ADPRMQ3LIE5 342 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 PDCD4Q53EL6 469 aaKnown RBP14.39□□□□□ -0.11
HOXC11-202ENST00000546378 BORAQ6PGQ7 559 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 DEFB128Q7Z7B8 93 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 GPR156Q8NFN8 814 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 OR56A4Q8NGH8 313 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 MAL2Q969L2 176 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 LRRC3Q9BY71 257 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 RIC8BQ9NVN3 520 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 TRPM7Q96QT4 1865 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 RFXAPO00287 272 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 LDB2O43679 373 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 APOL3O95236 402 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 ODC1P11926 461 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 CD36P16671 472 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 ALDH3A2P51648 485 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 TAF10Q12962 218 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 NLGN4XQ8N0W4 816 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 TMEM199Q8N511 208 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 RSPH1Q8WYR4 309 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 ISL2Q96A47 359 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 UBXN10Q96LJ8 280 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 NTN4Q9HB63 628 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 SDR39U1Q9NRG7 319 aaPredicted RBP14.39□□□□□ -0.11
HOXC11-202ENST00000546378 INTS10Q9NVR2 710 aaKnown RBP14.39□□□□□ -0.11
HOXC11-202ENST00000546378 ERVK13-1Q9NX77 482 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 SAMHD1Q9Y3Z3 626 aaKnown RBP14.39□□□□□ -0.11
HOXC11-202ENST00000546378 TESMINQ9Y4I5 508 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 PCDHA9Q9Y5H5 950 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 GPR45Q9Y5Y3 372 aa14.39□□□□□ -0.11
HOXC11-202ENST00000546378 LRRC37A2A6NM11 1700 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 A0A1W2PQ45 241 aaPredicted RBP14.38□□□□□ -0.11
HOXC11-202ENST00000546378 A0A1W2PQY0 241 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 CXCR6O00574 342 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 RAD51BO15315 384 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 ABCB7O75027 752 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 FCGR1AP12314 374 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 PDE12Q6L8Q7 609 aaKnown RBP14.38□□□□□ -0.11
HOXC11-202ENST00000546378 TIGD7Q6NT04 549 aaPredicted RBP14.38□□□□□ -0.11
HOXC11-202ENST00000546378 DOK6Q6PKX4 331 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 SCD5Q86SK9 330 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 HIPK1Q86Z02 1210 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 TOP6BLQ8N6T0 577 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 CHDHQ8NE62 594 aaPredicted RBP14.38□□□□□ -0.11
HOXC11-202ENST00000546378 NTAN1Q96AB6 310 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 FUBP1Q96AE4 644 aaKnown RBP14.38□□□□□ -0.11
HOXC11-202ENST00000546378 CEP19Q96LK0 163 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 Q96MT0 163 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 SERPINB11Q96P15 392 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 ALPK1Q96QP1 1244 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 POLR1EQ9GZS1 481 aaKnown RBP14.38□□□□□ -0.11
HOXC11-202ENST00000546378 RHCGQ9UBD6 479 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 PCDHGA3Q9Y5H0 932 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 PMF1-BGLAPU3KQ54 211 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 RANBP2P49792 3224 aaKnown RBP14.38□□□□□ -0.11
HOXC11-202ENST00000546378 SLC1A7O00341 560 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 PRMT5O14744 637 aaPredicted RBP14.38□□□□□ -0.11
HOXC11-202ENST00000546378 PER2O15055 1255 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 KPNA5O15131 536 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 TSC22D2O75157 780 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 PRSS23O95084 383 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 WARSP23381 471 aaKnown RBP14.38□□□□□ -0.11
HOXC11-202ENST00000546378 GRK3P35626 688 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 BOP1Q14137 746 aaKnown RBP14.38□□□□□ -0.11
HOXC11-202ENST00000546378 C1QTNF12Q5T7M4 302 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 P2RY8Q86VZ1 359 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 CYP4Z1Q86W10 505 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 HS6ST3Q8IZP7 471 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 THEM5Q8N1Q8 247 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 RAB2BQ8WUD1 216 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 NT5C3BQ969T7 300 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms