RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 FBXO43Q4G163 708 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 TCHHL1Q5QJ38 904 aaPredicted RBP8.46□□□□□ -1.06
CLIP1-218ENST00000545889 LDLRAP1Q5SW96 308 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 ARHGAP40Q5TG30 622 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 OGFOD2Q6N063 350 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 RTL4Q6ZR62 310 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 CLNKQ7Z7G1 428 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 DNASE1L2Q92874 299 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 PSMG2Q969U7 264 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 TPSD1Q9BZJ3 242 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 C12orf4Q9NQ89 552 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 FAM221BA6H8Z2 402 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 PI15O43692 258 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 GJB5O95377 273 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 DLDP09622 509 aaKnown RBP8.46□□□□□ -1.06
CLIP1-218ENST00000545889 TPTEP56180 551 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 NRG3P56975 720 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 TTC27Q6P3X3 843 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 BTN2A1Q7KYR7 527 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 ANKRD33Q7Z3H0 272 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 TCAIMQ8N3R3 496 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 OXR1Q8N573 874 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 PLD5Q8N7P1 536 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 RTL3Q8N8U3 475 aaKnown RBP8.46□□□□□ -1.06
CLIP1-218ENST00000545889 ZMIZ2Q8NF64 920 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 PCDH19Q8TAB3 1148 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 DENND1AQ8TEH3 1009 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 STYXQ8WUJ0 223 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 XAGE5Q8WWM1 108 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 CDADC1Q9BWV3 514 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 PCBD2Q9H0N5 130 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 KLHL1Q9NR64 748 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 RCOR3Q9P2K3 495 aaPredicted RBP8.46□□□□□ -1.06
CLIP1-218ENST00000545889 IL36AQ9UHA7 158 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 TBX21Q9UL17 535 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 HCN2Q9UL51 889 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 NOX1Q9Y5S8 564 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 J3QRK9 145 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 CCRL2O00421 344 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 DEAF1O75398 565 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 BANF1O75531 89 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 RFPL2O75678 378 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 SEMA3DO95025 777 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 NUDT17P0C025 328 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 MYL12AP19105 171 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 TALDO1P37837 337 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 SLC1A6P48664 564 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 BCAP31P51572 246 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 NR1H2P55055 460 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 PTSQ03393 145 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 IL10RBQ08334 325 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 ELOCQ15369 112 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 DPY19L2P1Q6NXN4 242 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 TXNDC11Q6PKC3 985 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 RPTNQ6XPR3 784 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 DHDDSQ86SQ9 333 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 TMEM126BQ8IUX1 230 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 PCDH20Q8N6Y1 951 aaKnown RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 UBR7Q8N806 425 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 GAB3Q8WWW8 586 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 KCTD13Q8WZ19 329 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 FBXL8Q96CD0 374 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 MAELQ96JY0 434 aaKnown RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 TBATAQ96M53 351 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 PANX1Q96RD7 426 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 ZNF607Q96SK3 696 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 SMG9Q9H0W8 520 aaKnown RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 NECTIN3Q9NQS3 549 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 KPNA4O00629 521 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 SLC28A2O43868 658 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 FKBP6O75344 327 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 LRATO95237 230 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 PEX2P28328 305 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 FRG1Q14331 258 aaKnown RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 KIAA0319Q5VV43 1072 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 TRAF7Q6Q0C0 670 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 TMEM26Q6ZUK4 368 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 TMC8Q8IU68 726 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 CAMK1DQ8IU85 385 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 RASGEF1AQ8N9B8 481 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 SIDT2Q8NBJ9 832 aaKnown RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 KCT2Q8NC54 265 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 PEBP4Q96S96 227 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 CFHR5Q9BXR6 569 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 SLC25A51Q9H1U9 297 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 SAR1AQ9NR31 198 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 AP3M1Q9Y2T2 418 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 FUOMA2VDF0 154 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 TRAFD1O14545 582 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 GABRDO14764 452 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 HAPLN1P10915 354 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 MYOGP15173 224 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 TYRP1P17643 537 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 CDH5P33151 784 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 CLCNKAP51800 687 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 NDST2P52849 883 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 PLA2G16P53816 162 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 HADHBP55084 474 aaKnown RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 RAB10P61026 200 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 RFTN2Q52LD8 501 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms