RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 PGRP06401 933 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 CD9P21926 228 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 AKT1P31749 480 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 ACLYP53396 1101 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 PHC1P78364 1004 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 CD47Q08722 323 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 ATP1A4Q13733 1029 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 C6orf141Q5SZD1 244 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 LAIR2Q6ISS4 152 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 GALNT18Q6P9A2 607 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 NETO1Q8TDF5 533 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 BORCS5Q969J3 196 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 PPP3R2Q96LZ3 170 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 ZBTB18Q99592 522 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 OSBPL10Q9BXB5 764 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 GORASP2Q9H8Y8 452 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 DNAJB9Q9UBS3 223 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 EIF3LQ9Y262 564 aaKnown RBP15.49■□□□□ 0.07
LDLR-204ENST00000545707 CHD5Q8TDI0 1954 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 TRIM64BA6NI03 449 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 ULK1O75385 1050 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 PFKLP17858 780 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 FSHRP23945 695 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 OR1D2P34982 312 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 CCR3P51677 355 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 DPY19L1Q2PZI1 675 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 ADGRF1Q5T601 910 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 FBXO22Q8NEZ5 403 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 WFDC5Q8TCV5 224 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 PDLIM5Q96HC4 596 aaKnown RBP15.48■□□□□ 0.07
LDLR-204ENST00000545707 CASD1Q96PB1 797 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 OR52E6Q96RD3 313 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 TUBA1CQ9BQE3 449 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 HPS4Q9NQG7 708 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 OPTCQ9UBM4 332 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 FBXO10Q9UK96 956 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 RGS14O43566 566 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 CLDN7O95471 211 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 BCL10O95999 233 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 MYCLP1P12525 358 aaPredicted RBP15.48■□□□□ 0.07
LDLR-204ENST00000545707 HMGCLP35914 325 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 PPP2R2BQ00005 443 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 CBX2Q14781 532 aaPredicted RBP15.48■□□□□ 0.07
LDLR-204ENST00000545707 PON2Q15165 354 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 CPSF6Q16630 551 aaKnown RBP eCLIP15.48■□□□□ 0.07
LDLR-204ENST00000545707 PIWIL3Q7Z3Z3 882 aaKnown RBP15.48■□□□□ 0.07
LDLR-204ENST00000545707 ADGRG2Q8IZP9 1017 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 DBF4BQ8NFT6 615 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 PNPT1Q8TCS8 783 aaKnown RBP15.48■□□□□ 0.07
LDLR-204ENST00000545707 RHBDF1Q96CC6 855 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 FAM126AQ9BYI3 521 aaPredicted RBP15.48■□□□□ 0.07
LDLR-204ENST00000545707 CCDC90BQ9GZT6 254 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 TMEM161AQ9NX61 479 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 PCDHB14Q9Y5E9 798 aa15.48■□□□□ 0.07
LDLR-204ENST00000545707 KRT87PA6NCN2 255 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 GRXCR2A6NFK2 248 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 SMAD6O43541 496 aaKnown RBP15.47■□□□□ 0.07
LDLR-204ENST00000545707 TBL1XO60907 577 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 MITFO75030 526 aaPredicted RBP15.47■□□□□ 0.07
LDLR-204ENST00000545707 E2F6O75461 281 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 GNPDA1P46926 289 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 TMBIM6P55061 237 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 AQP6Q13520 282 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 SPCS2Q15005 226 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 GTF2IRD2BQ6EKJ0 949 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 DET1Q7L5Y6 550 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 GALNT5Q7Z7M9 940 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 GTF2IRD2Q86UP8 949 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 STK40Q8N2I9 435 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 CCDC138Q96M89 665 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 BARD1Q99728 777 aaKnown RBP15.47■□□□□ 0.07
LDLR-204ENST00000545707 INPP5KQ9BT40 448 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 TTLL2Q9BWV7 592 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 CD244Q9BZW8 370 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 IL26Q9NPH9 171 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 LATS2Q9NRM7 1088 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 PAK1IP1Q9NWT1 392 aaPredicted RBP15.47■□□□□ 0.07
LDLR-204ENST00000545707 AFF4Q9UHB7 1163 aaKnown RBP15.47■□□□□ 0.07
LDLR-204ENST00000545707 PDE10AQ9Y233 779 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 DLGAP4Q9Y2H0 992 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 ZNF510Q9Y2H8 683 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 PCDHB7Q9Y5E2 793 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 XPNPEP2O43895 674 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 FZD6O60353 706 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 INMTO95050 263 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 SEC24AO95486 1093 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 GLUD1P00367 558 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 SERPINA1P01009 418 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 ZNF7P17097 686 aaPredicted RBP15.47■□□□□ 0.07
LDLR-204ENST00000545707 JUNBP17275 347 aaPredicted RBP15.47■□□□□ 0.07
LDLR-204ENST00000545707 NEK2P51955 445 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 ARHGEF7Q14155 803 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 SPIDRQ14159 915 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 MOGQ16653 247 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 RUNDC3AQ59EK9 446 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 TTC23Q5W5X9 447 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 PRR23BQ6ZRT6 265 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 PARP8Q8N3A8 854 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 TERB1Q8NA31 727 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 DDHD1Q8NEL9 900 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms