RNA–Protein interactions for RNA: ENST00000545518.1

IST1-223, Transcript of IST1, ESCRT-III associated factor, human

TSL 2

Gene IST1, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IST1-223	ENST00000545518	UBXN7	O94888	489 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	MATN4	O95460	622 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	PROS1	P07225	676 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	TPBGL	P0DKB5	382 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	CBSL	P0DN79	551 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	HOXB3	P14651	431 aa	Predicted RBP	11.73	□□□□□ -0.53
IST1-223	ENST00000545518	JUP	P14923	745 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	TYRP1	P17643	537 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	FDXR	P22570	491 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	MCM3	P25205	808 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	CSF2RB	P32927	897 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	CBS	P35520	551 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	MAPK9	P45984	424 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	PDX1	P52945	283 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	PMS2	P54278	862 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	TAS2R39	P59534	338 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	VSNL1	P62760	191 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	ILF2	Q12905	390 aa	Known RBP	11.73	□□□□□ -0.53
IST1-223	ENST00000545518	CLPP	Q16740	277 aa	Predicted RBP	11.73	□□□□□ -0.53
IST1-223	ENST00000545518	ERCC6L	Q2NKX8	1250 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	TTLL9	Q3SXZ7	439 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	GRTP1	Q5TC63	336 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	WDR74	Q6RFH5	385 aa	Predicted RBP	11.73	□□□□□ -0.53
IST1-223	ENST00000545518	PAQR3	Q6TCH7	311 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	NEK10	Q6ZWH5	1172 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	CPNE9	Q8IYJ1	553 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	TBC1D21	Q8IYX1	336 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	EEF1AKMT1	Q8WVE0	214 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	SKA2	Q8WVK7	121 aa	Predicted RBP	11.73	□□□□□ -0.53
IST1-223	ENST00000545518	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.73	□□□□□ -0.53	2e-9	■■■■■ 31.1
IST1-223	ENST00000545518	NCSTN	Q92542	709 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	AHCYL2	Q96HN2	611 aa	Known RBP	11.73	□□□□□ -0.53
IST1-223	ENST00000545518	ELMO2	Q96JJ3	720 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	NRTN	Q99748	197 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	HGH1	Q9BTY7	390 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	TRIT1	Q9H3H1	467 aa	Known RBP	11.73	□□□□□ -0.53
IST1-223	ENST00000545518	TFB2M	Q9H5Q4	396 aa	Known RBP	11.73	□□□□□ -0.53
IST1-223	ENST00000545518	POLG2	Q9UHN1	485 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	TSR3	Q9UJK0	312 aa	Known RBP	11.73	□□□□□ -0.53
IST1-223	ENST00000545518	RUVBL2	Q9Y230	463 aa	Known RBP	11.73	□□□□□ -0.53
IST1-223	ENST00000545518	NFS1	Q9Y697	457 aa		11.73	□□□□□ -0.53
IST1-223	ENST00000545518	EIF3F	O00303	357 aa	Predicted RBP	11.72	□□□□□ -0.53
IST1-223	ENST00000545518	RIPK2	O43353	540 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	DUX1	O43812	170 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	CS	O75390	466 aa	Known RBP	11.72	□□□□□ -0.53
IST1-223	ENST00000545518	C1orf105	O95561	183 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	ABHD2	P08910	425 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	ENO3	P13929	434 aa	Predicted RBP	11.72	□□□□□ -0.53
IST1-223	ENST00000545518	AMD1	P17707	334 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	SAT1	P21673	171 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	SPR	P35270	261 aa	Predicted RBP	11.72	□□□□□ -0.53
IST1-223	ENST00000545518	LIMK2	P53671	638 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	ZFP36L1	Q07352	338 aa	Known RBP	11.72	□□□□□ -0.53
IST1-223	ENST00000545518	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.72	□□□□□ -0.53	3e-6	■■■■□ 20.8
IST1-223	ENST00000545518	PDAP1	Q13442	181 aa	Known RBP	11.72	□□□□□ -0.53
IST1-223	ENST00000545518	GRB7	Q14451	532 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	PLCL1	Q15111	1095 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	ISX	Q2M1V0	245 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	WDR93	Q6P2C0	686 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	TMEM71	Q6P5X7	295 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	B3GNT8	Q7Z7M8	397 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	RASGRP3	Q8IV61	690 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	CEP97	Q8IW35	865 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	OR4E2	Q8NGC2	313 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	OR4D9	Q8NGE8	314 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	OR52E1	Q8NGJ3	308 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	UHMK1	Q8TAS1	419 aa	Known RBP	11.72	□□□□□ -0.53
IST1-223	ENST00000545518	LCN9	Q8WX39	176 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	ASB11	Q8WXH4	323 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	RSC1A1	Q92681	617 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	MRRF	Q96E11	262 aa	Known RBP	11.72	□□□□□ -0.53
IST1-223	ENST00000545518	DEPDC7	Q96QD5	511 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	GPR22	Q99680	433 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	DPYSL5	Q9BPU6	564 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	SCNM1	Q9BWG6	230 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	EPB41L4B	Q9H329	900 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	SEMA6C	Q9H3T2	930 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	TMEM9	Q9P0T7	183 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	KLK13	Q9UKR3	277 aa		11.72	□□□□□ -0.53
IST1-223	ENST00000545518	TDRKH	Q9Y2W6	561 aa	Known RBP	11.72	□□□□□ -0.53
IST1-223	ENST00000545518		A0A087WUV0	522 aa	Predicted RBP	11.71	□□□□□ -0.53
IST1-223	ENST00000545518	IGHV5-10-1	A0A0J9YXX1	117 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	PSIP1	O75475	530 aa	Known RBP	11.71	□□□□□ -0.53
IST1-223	ENST00000545518	TSPAN12	O95859	305 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	RPN2	P04844	631 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	ITGA2B	P08514	1039 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	MPC1L	P0DKB6	136 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	SPINK2	P20155	84 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	MPST	P25325	297 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	CAPZB	P47756	277 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	PPM1F	P49593	454 aa	Predicted RBP	11.71	□□□□□ -0.53
IST1-223	ENST00000545518	RGS4	P49798	205 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	IL2	P60568	153 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	POU4F1	Q01851	419 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	SLC29A2	Q14542	456 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	MAP9	Q49MG5	647 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	TMEM207	Q6UWW9	146 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	PIWIL4	Q7Z3Z4	852 aa	Known RBP	11.71	□□□□□ -0.53
IST1-223	ENST00000545518	SLITRK4	Q8IW52	837 aa		11.71	□□□□□ -0.53
IST1-223	ENST00000545518	DCUN1D3	Q8IWE4	304 aa		11.71	□□□□□ -0.53

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