RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 CUL9Q8IWT3 2517 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 SLC5A10A0PJK1 596 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 NEMP2A6NFY4 417 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 NUAK1O60285 661 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 DLX3O60479 287 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 VPS26AO75436 327 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 SLCO2B1O94956 709 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 TRIM16O95361 564 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 ACADMP11310 421 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 MYCLP1P12525 358 aaPredicted RBP6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 ATP6V1C1P21283 382 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 AKT1P31749 480 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 CPOXP36551 454 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 CXCL12P48061 93 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 KPNB1Q14974 876 aaKnown RBP6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 NAA25Q14CX7 972 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 MAPRE2Q15555 327 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 TSNQ15631 228 aaKnown RBP6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 ZXDCQ2QGD7 858 aaPredicted RBP6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 C1orf146Q5VVC0 180 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 FAM219BQ5XKK7 198 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 PTRHD1Q6GMV3 140 aaKnown RBP6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 TSSK4Q6SA08 328 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 ABI3BPQ7Z7G0 1075 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 ZBTB2Q8N680 514 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 ZNF781Q8N8C0 355 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 CEP70Q8NHQ1 597 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 DNAJC9Q8WXX5 260 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 KIAA1191Q96A73 305 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 LINGO1Q96FE5 620 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 LINC00615Q96LM1 132 aaPredicted RBP6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 IER2Q9BTL4 223 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 GPR174Q9BXC1 333 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 FAM126AQ9BYI3 521 aaPredicted RBP6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 WDR26Q9H7D7 661 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 SYTL2Q9HCH5 934 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 TM7SF3Q9NS93 570 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 SPATS2LQ9NUQ6 558 aaKnown RBP6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 KCTD5Q9NXV2 234 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 CPSF2Q9P2I0 782 aaKnown RBP6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 ADAMTS6Q9UKP5 1117 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 NCKAP1Q9Y2A7 1128 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 SLC17A4Q9Y2C5 497 aa6.86□□□□□ -1.31
HMGCS2-204ENST00000544913 ZNF318Q5VUA4 2279 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 CACNA1EQ15878 2313 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 KRT87PA6NCN2 255 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 NPEPPSL1A6NEC2 478 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 LRRC72A6NJI9 287 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 NVLO15381 856 aaKnown RBP6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 VEGFDO43915 354 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 KLK8O60259 260 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 IPO13O94829 963 aaKnown RBP6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 CDK14O94921 469 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 HOXC4P09017 264 aaPredicted RBP6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 COX4I1P13073 169 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 CHRM3P20309 590 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 HNRNPA2B1P22626 353 aaKnown RBP6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 PPARGP37231 505 aaPredicted RBP6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 NAGLUP54802 743 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 KIAA1024LP59773 190 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 BTKQ06187 659 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 KLF10Q13118 480 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 PDAP1Q13442 181 aaKnown RBP6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 RCN1Q15293 331 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 PHKG1Q16816 387 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 MUM1Q2TAK8 710 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 ARL13AQ5H913 290 aaPredicted RBP6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 PGM2L1Q6PCE3 622 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 MYLK4Q86YV6 388 aaPredicted RBP6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 CAMKK1Q8N5S9 505 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 NELL1Q92832 810 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 MOCOSQ96EN8 888 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 PDXPQ96GD0 296 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 PRR11Q96HE9 360 aaPredicted RBP6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 UHRF1Q96T88 793 aaPredicted RBP6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 APOOQ9BUR5 198 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 ALG9Q9H6U8 611 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 NKX1-2Q9UD57 310 aaPredicted RBP6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 TRMT6Q9UJA5 497 aaKnown RBP6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 TMCO1Q9UM00 188 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 INVSQ9Y283 1065 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 PRKAB1Q9Y478 270 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 ASB1Q9Y576 335 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 MYO15AQ9UKN7 3530 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 ANKRD12Q6UB98 2062 aa6.85□□□□□ -1.31
HMGCS2-204ENST00000544913 A0A088AWK7 358 aa6.84□□□□□ -1.31
HMGCS2-204ENST00000544913 A0A1W2PPC4 97 aa6.84□□□□□ -1.31
HMGCS2-204ENST00000544913 A0A1W2PR77 199 aa6.84□□□□□ -1.31
HMGCS2-204ENST00000544913 TMEM221A6NGB7 291 aa6.84□□□□□ -1.31
HMGCS2-204ENST00000544913 A8MT66 165 aa6.84□□□□□ -1.31
HMGCS2-204ENST00000544913 METTL12A8MUP2 240 aa6.84□□□□□ -1.31
HMGCS2-204ENST00000544913 M0R296 226 aa6.84□□□□□ -1.31
HMGCS2-204ENST00000544913 MAP3K7O43318 606 aa6.84□□□□□ -1.31
HMGCS2-204ENST00000544913 KIF1CO43896 1103 aaKnown RBP6.84□□□□□ -1.31
HMGCS2-204ENST00000544913 GPR37L1O60883 481 aa6.84□□□□□ -1.31
HMGCS2-204ENST00000544913 ZNF217O75362 1048 aa6.84□□□□□ -1.31
HMGCS2-204ENST00000544913 MATN4O95460 622 aa6.84□□□□□ -1.31
HMGCS2-204ENST00000544913 WNT1P04628 370 aa6.84□□□□□ -1.31
HMGCS2-204ENST00000544913 PYGLP06737 847 aa6.84□□□□□ -1.31
HMGCS2-204ENST00000544913 RPSAP08865 295 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms