RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 MYL2P10916 166 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 NEFHP12036 1026 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 CPA3P15088 417 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 CREB1P16220 341 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 CYP2A7P20853 494 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 IDSP22304 550 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 MDH1P40925 334 aaKnown RBP9.31□□□□□ -0.92
YBX3-215ENST00000544504 ATP1A2P50993 1020 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 AFF3P51826 1226 aaKnown RBP9.31□□□□□ -0.92
YBX3-215ENST00000544504 SRP54P61011 504 aaKnown RBP9.31□□□□□ -0.92
YBX3-215ENST00000544504 IRF9Q00978 393 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 PPARDQ03181 441 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 PYCR3Q53H96 274 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 ACSBG2Q5FVE4 666 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 TECRLQ5HYJ1 363 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 CDKL4Q5MAI5 379 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 TTC23LQ6PF05 361 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 TMEM207Q6UWW9 146 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 FRA10AC1Q70Z53 315 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 GLRX5Q86SX6 157 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 TAX1BP1Q86VP1 789 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 PARGQ86W56 976 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 GPSM1Q86YR5 675 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 SLC22A9Q8IVM8 553 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 ZNF547Q8IVP9 402 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 NAXDQ8IW45 347 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 CFAP206Q8IYR0 622 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 SLC22A15Q8IZD6 547 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 SDR16C5Q8N3Y7 309 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 FRMD1Q8N878 549 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 PHC3Q8NDX5 983 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 OR13H1Q8NG92 308 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 GIMAP7Q8NHV1 300 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 LKAAEAR1Q8TD35 194 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 MAGEC3Q8TD91 643 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 MCOLN3Q8TDD5 553 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 EEF1AKMT1Q8WVE0 214 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 SKA2Q8WVK7 121 aaPredicted RBP9.31□□□□□ -0.92
YBX3-215ENST00000544504 ANKRD49Q8WVL7 239 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 FAM136AQ96C01 138 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 CCDC97Q96F63 343 aaPredicted RBP9.31□□□□□ -0.92
YBX3-215ENST00000544504 SLC6A18Q96N87 628 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 GPR78Q96P69 363 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 ORAI3Q9BRQ5 295 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 MIR1-1HGQ9H1L0 117 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 CARS2Q9HA77 564 aaKnown RBP9.31□□□□□ -0.92
YBX3-215ENST00000544504 EBF2Q9HAK2 575 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 CYP4F12Q9HCS2 524 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 TM9SF3Q9HD45 589 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 GPR27Q9NS67 375 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 TMEM216Q9P0N5 145 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 RNF112Q9ULX5 631 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 SUFUQ9UMX1 484 aa9.31□□□□□ -0.92
YBX3-215ENST00000544504 APC2O95996 2303 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 A0A1B0GTW7 788 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 A0A1W2PR77 199 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 H0Y8X5 98 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 TLR4O00206 839 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 VILLO15195 856 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 POLR3GO15318 223 aaPredicted RBP9.3□□□□□ -0.92
YBX3-215ENST00000544504 SNUPNO95149 360 aaKnown RBP9.3□□□□□ -0.92
YBX3-215ENST00000544504 TSPAN12O95859 305 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 HIST1H2AGP0C0S8 130 aaPredicted RBP9.3□□□□□ -0.92
YBX3-215ENST00000544504 SLC35G4P0C7Q5 338 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 DHRS4L1P0CG22 281 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 SLC2A4P14672 509 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 HIST1H2ADP20671 130 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 ATP5F1P24539 256 aaPredicted RBP9.3□□□□□ -0.92
YBX3-215ENST00000544504 MAP4P27816 1152 aaKnown RBP9.3□□□□□ -0.92
YBX3-215ENST00000544504 PBLDP30039 288 aaPredicted RBP9.3□□□□□ -0.92
YBX3-215ENST00000544504 HALP42357 657 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 ETV4P43268 484 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 GNPDA1P46926 289 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 GLRBP48167 497 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 SERPINB4P48594 390 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 AP1S2P56377 157 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 C21orf59P57076 290 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 CDKL1Q00532 357 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 ILF3Q12906 894 aaKnown RBP eCLIP9.3□□□□□ -0.92
YBX3-215ENST00000544504 MPP2Q14168 576 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 METRNLQ641Q3 311 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 ATG16L1Q676U5 607 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 UNC5DQ6UXZ4 953 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 ZYG11AQ6WRX3 759 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 CDHR3Q6ZTQ4 885 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 CHST15Q7LFX5 561 aaPredicted RBP9.3□□□□□ -0.92
YBX3-215ENST00000544504 TMPRSS7Q7RTY8 843 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 C11orf96Q7Z7L8 435 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 ISCA2Q86U28 154 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 HID1Q8IV36 788 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 NUDCD3Q8IVD9 361 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 HOMEZQ8IX15 550 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 ABCA7Q8IZY2 2146 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 PLD6Q8N2A8 252 aaKnown RBP9.3□□□□□ -0.92
YBX3-215ENST00000544504 TCAIMQ8N3R3 496 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 FSTL5Q8N475 847 aaPredicted RBP9.3□□□□□ -0.92
YBX3-215ENST00000544504 ARMC2Q8NEN0 867 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 OR2I1PQ8NGU4 316 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 PPP1R14CQ8TAE6 165 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 MGARPQ8TDB4 240 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms