RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 DHRS7Q9Y394 339 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 PSAT1Q9Y617 370 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 ACACAQ13085 2346 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 TCRBV9S1A1TA0A576 114 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 OR5K3A6NET4 321 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 PLD2O14939 933 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 TOX3O15405 576 aaPredicted RBP18.59■□□□□ 0.57
DDX55-211ENST00000544429 MPOP05164 745 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 AMD1P17707 334 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 CHRM3P20309 590 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 MLLT3P42568 568 aaPredicted RBP18.59■□□□□ 0.57
DDX55-211ENST00000544429 MAPK9P45984 424 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 GRB7Q14451 532 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 PHF19Q5T6S3 580 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 KLHL35Q6PF15 583 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 RAB11FIP2Q7L804 512 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 CD200R1Q8TD46 325 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 FAM136AQ96C01 138 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 NRTNQ99748 197 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 TRIT1Q9H3H1 467 aaKnown RBP18.59■□□□□ 0.57
DDX55-211ENST00000544429 ASCL3Q9NQ33 180 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 PPANQ9NQ55 473 aaKnown RBP18.59■□□□□ 0.57
DDX55-211ENST00000544429 POLG2Q9UHN1 485 aa18.59■□□□□ 0.57
DDX55-211ENST00000544429 TMEM8BA6NDV4 472 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 FAM159BA6NKW6 160 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 CDRT15L2A8MXV6 281 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 E5RI56 91 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 CAPN5O15484 640 aaPredicted RBP18.58■□□□□ 0.56
DDX55-211ENST00000544429 MPSTP25325 297 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 PPP1CAP62136 330 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 GABREP78334 506 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 PLCL1Q15111 1095 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 ACSBG2Q5FVE4 666 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 C3orf38Q5JPI3 329 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 RBM20Q5T481 1227 aaKnown RBP18.58■□□□□ 0.56
DDX55-211ENST00000544429 C3orf62Q6ZUJ4 267 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 NEK10Q6ZWH5 1172 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 PRSS42Q7Z5A4 293 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 ZC3HC1Q86WB0 502 aaKnown RBP18.58■□□□□ 0.56
DDX55-211ENST00000544429 PALM2Q8IXS6 379 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 RCBTB1Q8NDN9 531 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 SLC46A1Q96NT5 459 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 GPR21Q99679 349 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 CMKLR1Q99788 373 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 HGH1Q9BTY7 390 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 CCDC68Q9H2F9 335 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 ZFATQ9P243 1243 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 ICKQ9UPZ9 632 aa18.58■□□□□ 0.56
DDX55-211ENST00000544429 SNRNP200O75643 2136 aaKnown RBP18.58■□□□□ 0.56
DDX55-211ENST00000544429 CXorf49A8MYA2 514 aaPredicted RBP18.57■□□□□ 0.56
DDX55-211ENST00000544429 EIF3FO00303 357 aaPredicted RBP18.57■□□□□ 0.56
DDX55-211ENST00000544429 BRINP1O60477 761 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 CDKN2DP55273 166 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 CYP4F3Q08477 520 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 PRKG2Q13237 762 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 KRT33BQ14525 404 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 CCDC25Q86WR0 208 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 SPNS2Q8IVW8 549 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 DCUN1D3Q8IWE4 304 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 ADGRF3Q8IZF5 1079 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 LSMEM2Q8N112 164 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 BMPERQ8N8U9 685 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 SIDT2Q8NBJ9 832 aaKnown RBP18.57■□□□□ 0.56
DDX55-211ENST00000544429 OR4E2Q8NGC2 313 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 MDM1Q8TC05 714 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 LCN9Q8WX39 176 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 KLHL6Q8WZ60 621 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 INPP5DQ92835 1189 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 ZDHHC12Q96GR4 267 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 CNTNAP3BQ96NU0 1288 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 NDNQ99608 321 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 CNTNAP3Q9BZ76 1288 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 HRASLS2Q9NWW9 162 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 NSMCE4AQ9NXX6 385 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 LOXL2Q9Y4K0 774 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 NFS1Q9Y697 457 aa18.57■□□□□ 0.56
DDX55-211ENST00000544429 OR6C74A6NCV1 312 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 ESPNB1AK53 854 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 BTN3A3O00478 584 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 SPAG6O75602 509 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 C1orf105O95561 183 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 ITGA2BP08514 1039 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 CBSLP0DN79 551 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 CBSP35520 551 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 ABCG1P45844 678 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 ABRQ12979 859 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 CUL1Q13616 776 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 KYNUQ16719 465 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 CYHR1Q6ZMK1 362 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 CAPN12Q6ZSI9 719 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 CLEC14AQ86T13 490 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 AMIGO1Q86WK6 493 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 OOSP2Q86WS3 158 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 FBXO39Q8N4B4 442 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 AGBL5Q8NDL9 886 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 TGM7Q96PF1 710 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 CD180Q99467 661 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 B3GNT4Q9C0J1 378 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 TSPYL1Q9H0U9 437 aa18.56■□□□□ 0.56
DDX55-211ENST00000544429 SRMSQ9H3Y6 488 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms