RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 ARPINQ7Z6K5 226 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 MON1AQ86VX9 555 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 ADHFE1Q8IWW8 467 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 ACBD4Q8NC06 268 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 XAGE3Q8WTP9 111 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 CPPED1Q9BRF8 314 aaPredicted RBP8.75□□□□□ -1.01
VPS13D-212ENST00000543766 Q9H521 79 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 NRIP3Q9NQ35 241 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 C19orf12Q9NSK7 152 aa8.75□□□□□ -1.01
VPS13D-212ENST00000543766 LAMB1P07942 1786 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 FAM86C2PA6NEL3 165 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 USP17L15C9J2P7 530 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 USP17L10C9JJH3 530 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 USP17L12C9JPN9 530 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 USP17L11C9JVI0 530 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 USP17L21D6R901 530 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 USP17L18D6R9N7 530 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 USP17L22D6RA61 530 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 USP17L19D6RCP7 530 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 USP17L20D6RJB6 530 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 AIM2O14862 343 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 SRP72O76094 671 aaKnown RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 PSMG1O95456 288 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ADRB2P07550 413 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 THRAP10827 490 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 MAGEB1P43366 347 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 NAGLUP54802 743 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 USP17L24Q0WX57 530 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ALCAMQ13740 583 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ARL6IP1Q15041 203 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 KNOP1Q1ED39 458 aaKnown RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 RNFT1Q5M7Z0 435 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 BSPRYQ5W0U4 402 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 LIPIQ6XZB0 460 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 PRSS42Q7Z5A4 293 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 CAMKVQ8NCB2 501 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 WDR48Q8TAF3 677 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 C19orf60Q96EN9 201 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 MAGEB18Q96M61 343 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 FMO2Q99518 471 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ACO2Q99798 780 aaKnown RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 KCNS3Q9BQ31 491 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 PYM1Q9BRP8 204 aaKnown RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 GPR62Q9BZJ7 368 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 NMUR1Q9HB89 426 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 SPON1Q9HCB6 807 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 SMURF1Q9HCE7 757 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 C11orf16Q9NQ32 467 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 KLQ9UEF7 1012 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 MFHAS1Q9Y4C4 1052 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 MMACHCQ9Y4U1 282 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 POLR3HQ9Y535 204 aaPredicted RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ARAP2Q8WZ64 1704 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 PIPSLA2A3N6 862 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 OR6C75A6NL08 312 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 M0R296 226 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 SEC22BO75396 215 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 AP2A1O95782 977 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 OPN1LWP04000 364 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ZSCAN5DPP0CG00 497 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ITGA4P13612 1032 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 TAC1P20366 129 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 EEF1B2P24534 225 aaKnown RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 PTPN4P29074 926 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 FMO3P31513 532 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 PXNP49023 591 aaPredicted RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ARF3P61204 181 aaPredicted RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ARF1P84077 181 aaKnown RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 DUSP7Q16829 419 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 KIAA0319Q5VV43 1072 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 BROXQ5VW32 411 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 FSTL4Q6MZW2 842 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 TMEM81Q6P7N7 255 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 POLNQ7Z5Q5 900 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 TBC1D10CQ8IV04 446 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 HERC6Q8IVU3 1022 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 TRAM1L1Q8N609 369 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 PNMA1Q8ND90 353 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 CREB3L4Q8TEY5 395 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 CD101Q93033 1021 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 TP53INP1Q96A56 240 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 TRIM9Q9C026 710 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 METTL9Q9H1A3 318 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 BIN3Q9NQY0 253 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 INTS6Q9UL03 887 aaKnown RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 CAMK2AQ9UQM7 478 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 PIN4Q9Y237 131 aaKnown RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ANKDD1BA6NHY2 528 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 AHRRA9YTQ3 701 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 RGS16O15492 202 aaPredicted RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 DYRK3O43781 588 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 LIPFP07098 398 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ADRB1P08588 477 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 SMIM18P0DKX4 95 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 DGKAP23743 735 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ELK4P28324 431 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 CRABP1P29762 137 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 LEPRP48357 1165 aaKnown RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ALDH3B2P48448 385 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 SELENOVP59797 346 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms