RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 LDLRAD1Q5T700 205 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 PYHIN1Q6K0P9 492 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 P2RY8Q86VZ1 359 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 LRRN4CLQ8ND94 238 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 MAPK15Q8TD08 544 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 KCNJ9Q92806 393 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 DUSP23Q9BVJ7 150 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 HERC2P3Q9BVR0 1158 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 LGR4Q9BXB1 951 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 KAT8Q9H7Z6 458 aaKnown RBP7.69□□□□□ -1.18
VPS13D-211ENST00000543710 TAS2R1Q9NYW7 299 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 CNTN6Q9UQ52 1028 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 A0A0J9YVX5 310 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 E2F8A0AVK6 867 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 PLIN3O60664 434 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 UBXN7O94888 489 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 KLHL18O94889 574 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 TACSTD2P09758 323 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 PKMP14618 531 aaKnown RBP7.69□□□□□ -1.18
VPS13D-211ENST00000543710 PAX7P23759 505 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 CXCR3P49682 368 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 RRADP55042 308 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 USP46P62068 366 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 FOXK1P85037 733 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 TRIM32Q13049 653 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 ZBED5Q49AG3 693 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 TSTD2Q5T7W7 516 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 HGSNATQ68CP4 663 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 UBE2R2Q712K3 238 aaPredicted RBP7.69□□□□□ -1.18
VPS13D-211ENST00000543710 TTC7BQ86TV6 843 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 KCTD4Q8WVF5 259 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 SEMA4DQ92854 862 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 NAT6Q93015 286 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 AASSQ9UDR5 926 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 EXOSC1Q9Y3B2 195 aaKnown RBP7.69□□□□□ -1.18
VPS13D-211ENST00000543710 PCDHGA3Q9Y5H0 932 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 N4BP2Q86UW6 1770 aaPredicted RBP7.69□□□□□ -1.18
VPS13D-211ENST00000543710 USP54Q70EL1 1684 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 CLDN25C9JDP6 229 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 STX16-NPEPL1H3BU86 382 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 STX16O14662 325 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 ENTPD6O75354 484 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 IFNW1P05000 195 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 HMGN1P05114 100 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 CTPS1P17812 591 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 PFKLP17858 780 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 FLT3P36888 993 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 SELENOVP59797 346 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 PRR5P85299 388 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 DPYSL2Q16555 572 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 ZFP69Q49AA0 526 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 DCST1Q5T197 706 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 DDI2Q5TDH0 399 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 ATAD1Q8NBU5 361 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 IL31RAQ8NI17 732 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 MCFD2Q8NI22 146 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 ARMC5Q96C12 935 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 NXPE2Q96DL1 559 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 TMEM74Q96NL1 305 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 PANX1Q96RD7 426 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 FCRL5Q96RD9 977 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 ZCWPW1Q9H0M4 648 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 SGK2Q9HBY8 427 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 PDE7BQ9NP56 450 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 FBXO6Q9NRD1 293 aaPredicted RBP7.69□□□□□ -1.18
VPS13D-211ENST00000543710 PCDHB16Q9NRJ7 776 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 ZDHHC7Q9NXF8 308 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 RGS17Q9UGC6 210 aaPredicted RBP7.69□□□□□ -1.18
VPS13D-211ENST00000543710 COQ4Q9Y3A0 265 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 FADS3Q9Y5Q0 445 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 RGPD5Q99666 1765 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 OR14I1A6ND48 311 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 TNFRSF11BO00300 401 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 EML1O00423 815 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 PAPSS1O43252 624 aaPredicted RBP7.69□□□□□ -1.18
VPS13D-211ENST00000543710 VNN2O95498 520 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 MAPK3P27361 379 aaPredicted RBP7.69□□□□□ -1.18
VPS13D-211ENST00000543710 MTAPQ13126 283 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 C17orf99Q6UX52 265 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 ZNF367Q7RTV3 350 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 LHFPL3Q86UP9 236 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 GATAD2AQ86YP4 633 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 KLHL36Q8N4N3 616 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 C11orf65Q8NCR3 313 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 BPIFB6Q8NFQ5 453 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 LMX1AQ8TE12 382 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 SLC38A4Q969I6 547 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 DMAC2Q9NW81 257 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 XPR1Q9UBH6 696 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 ST14Q9Y5Y6 855 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 ATRNL1Q5VV63 1379 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 SLC28A2O43868 658 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 ZNF432O94892 652 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 LATS1O95835 1130 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 TOP3BO95985 862 aaKnown RBP7.69□□□□□ -1.18
VPS13D-211ENST00000543710 SLC35G4P0C7Q5 338 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 IMPDH1P20839 514 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 HRH2P25021 359 aa7.69□□□□□ -1.18
VPS13D-211ENST00000543710 DNAJA1P31689 397 aaKnown RBP7.69□□□□□ -1.18
VPS13D-211ENST00000543710 WASP42768 502 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms