RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 ETNK1Q9HBU6 452 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 PIH1D1Q9NWS0 290 aaKnown RBP15.16■□□□□ 0.02
VPS33A-206ENST00000542310 ACTR10Q9NZ32 417 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 POLG2Q9UHN1 485 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 TP53TG5Q9Y2B4 290 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 FER1L5A0AVI2 2057 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 SEC16AO15027 2179 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 CCDC162PA2VCL2 907 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 E7EVH7 732 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 KDM1AO60341 852 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 ST6GAL1P15907 406 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 ACADLP28330 430 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 RORAP35398 523 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 KLRB1Q12918 225 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 ABRQ12979 859 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 SYTL3Q4VX76 610 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 ZNF789Q5FWF6 425 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 TSTD2Q5T7W7 516 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 SPESP1Q6UW49 350 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 PPP1R21Q6ZMI0 780 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 ADGRF3Q8IZF5 1079 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 SPC24Q8NBT2 197 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 OR5K2Q8NHB8 316 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 ELMO1Q92556 727 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 MR1Q95460 341 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 TRAPPC9Q96Q05 1148 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 DPH2Q9BQC3 489 aaPredicted RBP15.15■□□□□ 0.02
VPS33A-206ENST00000542310 CASS4Q9NQ75 786 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 ZNF71Q9NQZ8 489 aaPredicted RBP15.15■□□□□ 0.02
VPS33A-206ENST00000542310 PAK5Q9P286 719 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 ICKQ9UPZ9 632 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 PRSS21Q9Y6M0 314 aa15.15■□□□□ 0.02
VPS33A-206ENST00000542310 SLC5A10A0PJK1 596 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 OR51F1A6NGY5 319 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 TMEM150CB9EJG8 249 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 MEN1O00255 615 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 IFNB1P01574 187 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 HBQ1P09105 142 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 CYP2A7P20853 494 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 ADRA1DP25100 572 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 PPARGP37231 505 aaPredicted RBP15.14■□□□□ 0.01
VPS33A-206ENST00000542310 LMAN1P49257 510 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 ITGA1P56199 1179 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 CCDC38Q502W7 563 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 AARS2Q5JTZ9 985 aaKnown RBP15.14■□□□□ 0.01
VPS33A-206ENST00000542310 PLEKHS1Q5SXH7 462 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 DRICH1Q6PGQ1 229 aaPredicted RBP15.14■□□□□ 0.01
VPS33A-206ENST00000542310 FBXO38Q6PIJ6 1188 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 MICALCLQ6ZW33 695 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 TMEM135Q86UB9 458 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 CCDC89Q8N998 374 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 C19orf47Q8N9M1 422 aaKnown RBP15.14■□□□□ 0.01
VPS33A-206ENST00000542310 OR5AR1Q8NGP9 310 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 OR1L3Q8NH93 324 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 RUFY1Q96T51 708 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 TSSK1BQ9BXA7 367 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 ACTR5Q9H9F9 607 aaPredicted RBP15.14■□□□□ 0.01
VPS33A-206ENST00000542310 AKIRIN1Q9H9L7 192 aaPredicted RBP15.14■□□□□ 0.01
VPS33A-206ENST00000542310 EIF2B3Q9NR50 452 aaKnown RBP15.14■□□□□ 0.01
VPS33A-206ENST00000542310 OR6C2Q9NZP2 312 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 ZNF148Q9UQR1 794 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 FARSAQ9Y285 508 aaKnown RBP15.14■□□□□ 0.01
VPS33A-206ENST00000542310 ASF1AQ9Y294 204 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 ZKSCAN5Q9Y2L8 839 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 TCAF1Q9Y4C2 921 aa15.14■□□□□ 0.01
VPS33A-206ENST00000542310 CCDC78A2IDD5 438 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 E7EQ34 232 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 ARHGAP6O43182 974 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 GOT2P00505 430 aaKnown RBP15.13■□□□□ 0.01
VPS33A-206ENST00000542310 RPS18P62269 152 aaKnown RBP15.13■□□□□ 0.01
VPS33A-206ENST00000542310 FOXK1P85037 733 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 IL10RAQ13651 578 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 DNAJC21Q5F1R6 531 aaKnown RBP15.13■□□□□ 0.01
VPS33A-206ENST00000542310 MEI1Q5TIA1 1274 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 FAM199XQ6PEV8 388 aaPredicted RBP15.13■□□□□ 0.01
VPS33A-206ENST00000542310 FAM198BQ6UWH4 519 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 C4orf22Q6V702 233 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 ZNF662Q6ZS27 426 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 HOOK3Q86VS8 718 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 SYTL1Q8IYJ3 562 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 TAB3Q8N5C8 712 aaPredicted RBP15.13■□□□□ 0.01
VPS33A-206ENST00000542310 SLC38A9Q8NBW4 561 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 PHC3Q8NDX5 983 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 PPHLN1Q8NEY8 458 aaKnown RBP15.13■□□□□ 0.01
VPS33A-206ENST00000542310 ADAMTS17Q8TE56 1095 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 HDAC10Q969S8 669 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 CLIP3Q96DZ5 547 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 C17orf62Q9BQA9 187 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 NLNQ9BYT8 704 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 CHST8Q9H2A9 424 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 RAB6BQ9NRW1 208 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 PCMTD2Q9NV79 361 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 SERTAD3Q9UJW9 196 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 GUCA1BQ9UMX6 200 aa15.13■□□□□ 0.01
VPS33A-206ENST00000542310 PCDHGA9Q9Y5G4 932 aaKnown RBP15.13■□□□□ 0.01
VPS33A-206ENST00000542310 MED13Q9UHV7 2174 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 PCM1Q15154 2024 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 AP3B1O00203 1094 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 UGT2B7P16662 529 aa15.12■□□□□ 0.01
VPS33A-206ENST00000542310 PRAMEP78395 509 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms