RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 C2orf81A6NN90 581 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 HACD1B0YJ81 288 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 H7C0C1 242 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 MSL3P1P0C860 447 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 ATP1B2P14415 290 aaPredicted RBP14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 MC4RP32245 332 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 ATP5OP48047 213 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 BOP1Q14137 746 aaKnown RBP14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 KRT33BQ14525 404 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 KYNUQ16719 465 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 ANKRD20A2Q5SQ80 823 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 ANKRD20A1Q5TYW2 823 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 ANKRD20A3Q5VUR7 823 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 FAM20CQ8IXL6 584 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 PIANPQ8IYJ0 282 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 CISD2Q8N5K1 135 aaKnown RBP14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 LMNTD1Q8N9Z9 388 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 OR5AR1Q8NGP9 310 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 CCDC110Q8TBZ0 833 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 ACTL9Q8TC94 416 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 CDYLQ9Y232 598 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 PCDHGB7Q9Y5F8 929 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 CSAG2Q9Y5P2 127 aa14.96□□□□□ -0.01
CLSTN3-213ENST00000541953 CSMD2Q7Z408 3487 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 TRBV5-4A0A0C4DH59 114 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 C5orf60A6NFR6 353 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 E7EQ34 232 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 APOC4-APOC2K7ER74 178 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 ALOX12BO75342 701 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 ZRANB2O95218 330 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 CBX6O95503 412 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 LDLRP01130 860 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 APOC2P02655 101 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 PEBP1P30086 187 aaKnown RBP14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 HADHBP55084 474 aaKnown RBP14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 TRIM14Q14142 442 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 SPESP1Q6UW49 350 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 MED25Q71SY5 747 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 SNX20Q7Z614 316 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 SERPINA9Q86WD7 417 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 AMIGO1Q86WK6 493 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 TMEM102Q8N9M5 508 aaPredicted RBP14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 DCUN1D1Q96GG9 259 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 GBP5Q96PP8 586 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 COPS8Q99627 209 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 CCM2Q9BSQ5 444 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 TFB2MQ9H5Q4 396 aaKnown RBP14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 ZNF552Q9H707 407 aaPredicted RBP14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 ZNHIT6Q9NWK9 470 aaKnown RBP14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 CUEDC1Q9NWM3 386 aaPredicted RBP14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 PIH1D1Q9NWS0 290 aaKnown RBP14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 ZDHHC3Q9NYG2 299 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 DHCR7Q9UBM7 475 aaKnown RBP14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 INTUQ9ULD6 942 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 PLAGL1Q9UM63 463 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 ABCA12Q86UK0 2595 aa14.95□□□□□ -0.02
CLSTN3-213ENST00000541953 MDC1Q14676 2089 aaKnown RBP14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 MACROD2A1Z1Q3 448 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 WIPF3A6NGB9 483 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 ANXA9O76027 345 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 UMODP07911 640 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 UGT2B7P16662 529 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 ITGALP20701 1170 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 ITGAXP20702 1163 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 ACRV1P26436 265 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 DCTP40126 519 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 DBN1Q16643 649 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 CRB2Q5IJ48 1285 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 VWA5B1Q5TIE3 1220 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 MLIPQ5VWP3 458 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 PPP1R32Q7Z5V6 425 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 RCOR2Q8IZ40 523 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 C19orf47Q8N9M1 422 aaKnown RBP14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 OR2A14Q96R47 310 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 TBL1YQ9BQ87 522 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 SLC22A11Q9NSA0 550 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 PTRH2Q9Y3E5 179 aaKnown RBP14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 HEBP2Q9Y5Z4 205 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 CREBBPQ92793 2442 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 DOCK10Q96BY6 2186 aa14.94□□□□□ -0.02
CLSTN3-213ENST00000541953 ANKRD12Q6UB98 2062 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 C17orf113A0A1B0GUU1 675 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 CCDC78A2IDD5 438 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 RCCD1A6NED2 376 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 OR51F1A6NGY5 319 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 C2orf74A8MZ97 194 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 C9J4A7 227 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 MATN2O00339 956 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 KCNN4O15554 427 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 PJA2O43164 708 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 TPH1P17752 444 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 TBX2Q13207 712 aaPredicted RBP14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 BRD3Q15059 726 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 ZRANB3Q5FWF4 1079 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 DCAF10Q5QP82 559 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 UNC5AQ6ZN44 842 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 MAMDC2Q7Z304 686 aaPredicted RBP14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 CUZD1Q86UP6 607 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 RAB43Q86YS6 212 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 KLHDC8BQ8IXV7 354 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms