RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 CLCN7P51798 805 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 STX5Q13190 355 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 DAG1Q14118 895 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 GPR33Q49SQ1 333 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 KLHL12Q53G59 568 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 GPR158Q5T848 1215 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 IER5Q5VY09 327 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 LCN8Q6JVE9 175 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 POTEGQ6S5H5 508 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 RRM2BQ7LG56 351 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 ERO1BQ86YB8 467 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 GPR156Q8NFN8 814 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 HAS1Q92839 578 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 KLRG1Q96E93 195 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 TOX2Q96NM4 488 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 GAS2L1Q99501 681 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-214ENST00000540539 PAPOLGQ9BWT3 736 aaKnown RBP9.29□□□□□ -0.92
CLIP1-214ENST00000540539 ACTR6Q9GZN1 396 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 SLC22A4Q9H015 551 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 CPVLQ9H3G5 476 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 DNAJC11Q9NVH1 559 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 LAMP5Q9UJQ1 280 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 ZNF112Q9UJU3 913 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 MAGED1Q9Y5V3 778 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-214ENST00000540539 A0A1W2PQ09 198 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 RRN3P2A6NIE6 340 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 ASB14A6NK59 587 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 NME4O00746 187 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 TRIM3O75382 744 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-214ENST00000540539 LCKP06239 509 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 GPIP06744 558 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 TPOP07202 933 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 ACAA1P09110 424 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-214ENST00000540539 FAM86B2P0C5J1 330 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 TRHRP34981 398 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-214ENST00000540539 ADRA1BP35368 520 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 GSTM5P46439 218 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 PREPP48147 710 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 P2RY4P51582 365 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 DYNLT1P63172 113 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 HOXC5Q00444 222 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 BAK1Q16611 211 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 CYP51A1Q16850 503 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 TATDN3Q17R31 274 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 TRIM60Q495X7 471 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 EPC2Q52LR7 807 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 PPM1JQ5JR12 505 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 TOR1AIP1Q5JTV8 583 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 CDKL4Q5MAI5 379 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 USP45Q70EL2 814 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 ENOSF1Q7L5Y1 443 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 OVCH2Q7RTZ1 564 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 BNIPLQ7Z465 357 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 SYVN1Q86TM6 617 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 RBFAQ8N0V3 343 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 SVIPQ8NHG7 77 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 TMC2Q8TDI7 906 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 SHC3Q92529 594 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 GTF3AQ92664 365 aaKnown RBP9.29□□□□□ -0.92
CLIP1-214ENST00000540539 PYCR2Q96C36 320 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 PGAP3Q96FM1 320 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-214ENST00000540539 MYO19Q96H55 970 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 CELF6Q96J87 481 aaKnown RBP9.29□□□□□ -0.92
CLIP1-214ENST00000540539 ZNF285Q96NJ3 590 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 SLC30A2Q9BRI3 323 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 REG4Q9BYZ8 158 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 AMBRA1Q9C0C7 1298 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 PAK6Q9NQU5 681 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-214ENST00000540539 FAM118AQ9NWS6 357 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 BABAM2Q9NXR7 383 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 SLC17A6Q9P2U8 582 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 DCDC2Q9UHG0 476 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 MUTYHQ9UIF7 546 aa9.29□□□□□ -0.92
CLIP1-214ENST00000540539 hCG_1807616A0A1W2PRN6 198 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 SLC9B1P1A6NJY1 282 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 WDR64B1ANS9 1081 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 SIGLEC6O43699 453 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 AIREO43918 545 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 PAPSS2O95340 614 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 FADS2O95864 444 aaKnown RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 CBX7O95931 251 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 CSF2P04141 144 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 DSG3P32926 999 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 NOVP48745 357 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 RPL14P50914 215 aaKnown RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 ARSDP51689 593 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 FCGRTP55899 365 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 MAB21L1Q13394 359 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 DMC1Q14565 340 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 GRM4Q14833 912 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 ANGPT1Q15389 498 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 TTC23Q5W5X9 447 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 SLFN12LQ6IEE8 588 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 FAM45BPQ6NSW5 357 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 ATRAIDQ6UW56 229 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 SLC16A13Q7RTY0 426 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 CCDC116Q8IYX3 515 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 LNX2Q8N448 690 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 FAM45AQ8TCE6 357 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 ASB15Q8WXK1 588 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms