RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 S100A9P06702 114 aaKnown RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 SRPRAP08240 638 aaKnown RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 RAP2AP10114 183 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 HCAR3P49019 387 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 C1QTNF8P60827 252 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 HSPB3Q12988 150 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 CNKSR3Q6P9H4 555 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 PRR23BQ6ZRT6 265 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 OXR1Q8N573 874 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 NODALQ96S42 347 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 C11orf84Q9BUA3 381 aaPredicted RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ZSCAN5AQ9BUG6 496 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 MRM3Q9HC36 420 aaKnown RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ETAA1Q9NY74 926 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 CDC14AQ9UNH5 594 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ARL5AQ9Y689 179 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 OAS3Q9Y6K5 1087 aaKnown RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ATRNL1Q5VV63 1379 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 CCDC85CA6NKD9 419 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 WNT9AO14904 365 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 RENP00797 406 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ALPPP05187 535 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ERVK-8P63133 956 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF33AQ06730 810 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 FCHO2Q0JRZ9 810 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 SUZ12Q15022 739 aaKnown RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ARSIQ5FYB1 569 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 RBM48Q5RL73 367 aaKnown RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 MBOAT1Q6ZNC8 495 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 KBTBD7Q8WVZ9 684 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 RGMAQ96B86 450 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 PSKH2Q96QS6 385 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ATG10Q9H0Y0 220 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 SUV39H2Q9H5I1 410 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ITM2CQ9NQX7 267 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 SPATA7Q9P0W8 599 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 CNTN3Q9P232 1028 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 FBXW2Q9UKT8 454 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 PCDHGB1Q9Y5G3 927 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 KDM3BQ7LBC6 1761 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 TCEA3O75764 348 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF823P16415 610 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 WASP42768 502 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 IL18R1Q13478 541 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 PLET1Q6UQ28 207 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 GPALPP1Q8IXQ4 340 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 NRSN1Q8IZ57 195 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 FAM13CQ8NE31 585 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 OR10A6Q8NH74 314 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 DENND1AQ8TEH3 1009 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 CAPNS2Q96L46 248 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 C12orf66Q96MD2 445 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 APOBEC3GQ9HC16 384 aaKnown RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 TAS2R7Q9NYW3 318 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 NRP1O14786 923 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 AP2A2O94973 939 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 PRPS1L1P21108 318 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 CSKP41240 450 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 CLCN4P51793 760 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 HERC3Q15034 1050 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 INAVAQ3KP66 663 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 LINC00471Q8N535 108 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 UFD1Q92890 307 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 EBPLQ9BY08 206 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 MCM8Q9UJA3 840 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 TP73O15350 636 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 SLURP2P0DP57 97 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 PIM1P11309 404 aaPredicted RBP6.37□□□□□ -1.39
LSAMP-207ENST00000539563 DNASE1L1P49184 302 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 ADGRE1Q14246 886 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 CXorf57Q6NSI4 855 aaKnown RBP6.37□□□□□ -1.39
LSAMP-207ENST00000539563 OR5K1Q8NHB7 308 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 SLCO2A1Q92959 643 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 PLEKHA1Q9HB21 404 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 FKBPLQ9UIM3 349 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 ILVBLA1L0T0 632 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 YJEFN3A6XGL0 299 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 ARVCFO00192 962 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 IMPDH1P20839 514 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 PPP2R2BQ00005 443 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 TYSND1Q2T9J0 566 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 PUS10Q3MIT2 529 aaKnown RBP6.37□□□□□ -1.39
LSAMP-207ENST00000539563 MINDY4Q4G0A6 757 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 TIGD5Q53EQ6 642 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 LAPTM4BQ86VI4 370 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 SIX5Q8N196 739 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 CADM2Q8N3J6 435 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 IPCEF1Q8WWN9 437 aaPredicted RBP6.37□□□□□ -1.39
LSAMP-207ENST00000539563 C11orf24Q96F05 449 aaPredicted RBP6.37□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF570Q96NI8 536 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 DGAT2Q96PD7 388 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 SLC32A1Q9H598 525 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF304Q9HCX3 659 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 P2RX2Q9UBL9 471 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 DNAJB4Q9UDY4 337 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 CDH7Q9ULB5 785 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 FAM25EA8MYX2 175 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 RNF225M0QZC1 329 aaPredicted RBP6.37□□□□□ -1.39
LSAMP-207ENST00000539563 RB1P06400 928 aa6.37□□□□□ -1.39
LSAMP-207ENST00000539563 ACVR2AP27037 513 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms