RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CDK4P11802 303 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 ATP1B2P14415 290 aaPredicted RBP16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 AGTR2P50052 363 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 NR1H2P55055 460 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 CNTN1Q12860 1018 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 SFSWAPQ12872 951 aaKnown RBP16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 ZNF284Q2VY69 593 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 DSG4Q86SJ6 1040 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 CUZD1Q86UP6 607 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 GPSM1Q86YR5 675 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 ALDH16A1Q8IZ83 802 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 FAM156AQ8NDB6 213 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 ESAMQ96AP7 390 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 COQ10AQ96MF6 247 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 TMEM165Q9HC07 324 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 NFKBIL1Q9UBC1 381 aaPredicted RBP16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 CNOT11Q9UKZ1 510 aaKnown RBP16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 PADI4Q9UM07 663 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 C1QTNF3-AMACRE9PGA6 284 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 TRIM38O00635 465 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 DGKAP23743 735 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 CCR7P32248 378 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 P2RY2P41231 377 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 KIR2DL1P43626 348 aaPredicted RBP16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 ELP6Q0PNE2 266 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 ENPP2Q13822 863 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 PTK2BQ14289 1009 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 TGFBIQ15582 683 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 BORAQ6PGQ7 559 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 SBSNQ6UWP8 590 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 RAB44Q7Z6P3 723 aaPredicted RBP16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 RAD18Q9NS91 495 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 LRRK1Q38SD2 2015 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 F5P12259 2224 aa16.74■□□□□ 0.27
PCDHB17P-201ENST00000539533 GRXCR2A6NFK2 248 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 H0Y858 1186 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 PSMD11O00231 422 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 RECQL5O94762 991 aaPredicted RBP16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 OR56A5P0C7T3 313 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 ZNF26P17031 533 aaPredicted RBP16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 POU3F3P20264 500 aaPredicted RBP16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 EEF1DP29692 281 aaKnown RBP16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 RGS4P49798 205 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 LRIT3Q3SXY7 679 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 IL23RQ5VWK5 629 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 AMIGO2Q86SJ2 522 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 CEP70Q8NHQ1 597 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 SNRNP27Q8WVK2 155 aaKnown RBP16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 BTN2A2Q8WVV5 523 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 DTD2Q96FN9 168 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 EML4Q9HC35 981 aaKnown RBP16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 LATS2Q9NRM7 1088 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 K7ESM1 405 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 INPP4BO15327 924 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 KLK8O60259 260 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 HNRNPCP07910 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 C6P13671 934 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 ADRM1Q16186 407 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 C2orf27AQ580R0 203 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 CYHR1Q6ZMK1 362 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 NRSN1Q8IZ57 195 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 MYO1HQ8N1T3 1032 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 BEND7Q8N7W2 519 aaPredicted RBP16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 ATP6V1E2Q96A05 226 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 EME1Q96AY2 570 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 ASB9Q96DX5 294 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 ADA2Q9NZK5 511 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 CD274Q9NZQ7 290 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 AK5Q9Y6K8 562 aa16.73■□□□□ 0.27
PCDHB17P-201ENST00000539533 C2CD4DB7Z1M9 353 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 MID1O15344 667 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 SGTAO43765 313 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 MSH3P20585 1137 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 PCSK6P29122 969 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 CTHP32929 405 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 SH3BP2P78314 561 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 GALNT1Q10472 559 aaPredicted RBP16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 CHERPQ8IWX8 916 aaKnown RBP16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 AADATQ8N5Z0 425 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 DDHD1Q8NEL9 900 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 GAB3Q8WWW8 586 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 GLYATL1Q969I3 302 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 TRMOQ9BU70 441 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 TIMMDC1Q9NPL8 285 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 ASB1Q9Y576 335 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 OR2AG2A6NM03 316 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 SLC5A2P31639 672 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 DRD3P35462 400 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 TNFRSF4P43489 277 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 PSME3P61289 254 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 NRF1Q16656 503 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 PIP5KL1Q5T9C9 394 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 CLEC6AQ6EIG7 209 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 DUS1LQ6P1R4 473 aaKnown RBP16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 GK5Q6ZS86 529 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 TRPC4APQ8TEL6 797 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 MAELQ96JY0 434 aaKnown RBP16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 HDAC8Q9BY41 377 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 KCTD5Q9NXV2 234 aa16.72■□□□□ 0.27
PCDHB17P-201ENST00000539533 THEGQ9P2T0 379 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms