RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 USP53Q70EK8 1073 aa16.9■□□□□ 0.3
SLC3A2-213ENST00000539458 CTAGE3PQ8IX95 158 aa16.9■□□□□ 0.3
SLC3A2-213ENST00000539458 GRAMD1AQ96CP6 724 aa16.9■□□□□ 0.3
SLC3A2-213ENST00000539458 ATXN7L3BQ96GX2 97 aa16.9■□□□□ 0.3
SLC3A2-213ENST00000539458 NUDT22Q9BRQ3 303 aa16.9■□□□□ 0.3
SLC3A2-213ENST00000539458 HGH1Q9BTY7 390 aa16.9■□□□□ 0.3
SLC3A2-213ENST00000539458 FUT8Q9BYC5 575 aa16.9■□□□□ 0.3
SLC3A2-213ENST00000539458 RDH14Q9HBH5 336 aa16.9■□□□□ 0.3
SLC3A2-213ENST00000539458 OGFRQ9NZT2 677 aa16.9■□□□□ 0.3
SLC3A2-213ENST00000539458 POLG2Q9UHN1 485 aa16.9■□□□□ 0.3
SLC3A2-213ENST00000539458 TRMT6Q9UJA5 497 aaKnown RBP16.9■□□□□ 0.3
SLC3A2-213ENST00000539458 KLK13Q9UKR3 277 aa16.9■□□□□ 0.3
SLC3A2-213ENST00000539458 CEP295Q9C0D2 2601 aa16.9■□□□□ 0.3
SLC3A2-213ENST00000539458 CHD6Q8TD26 2715 aa16.9■□□□□ 0.3
SLC3A2-213ENST00000539458 PTPRBP23467 1997 aa16.89■□□□□ 0.3
SLC3A2-213ENST00000539458 FAM95CA0A1B0GW59 222 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 FAM149AA5PLN7 773 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 EIF3FO00303 357 aaPredicted RBP16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 CSO75390 466 aaKnown RBP16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 MATN4O95460 622 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 CBSLP0DN79 551 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 ENO3P13929 434 aaPredicted RBP16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 AMD1P17707 334 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 CBSP35520 551 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 GP5P40197 560 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 CAPZBP47756 277 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 CFHR1Q03591 330 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 TARDBPQ13148 414 aaKnown RBP eCLIP16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 ACSBG2Q5FVE4 666 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 UBAP2Q5T6F2 1119 aaKnown RBP16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 KLHL35Q6PF15 583 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 TMPRSS9Q7Z410 1059 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 PPM1NQ8N819 430 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 OR4D9Q8NGE8 314 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 OR52E1Q8NGJ3 308 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 SKA2Q8WVK7 121 aaPredicted RBP16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 JPH3Q8WXH2 748 aaPredicted RBP16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 NCSTNQ92542 709 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 GATA6Q92908 595 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 VPS39Q96JC1 886 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 ELMO2Q96JJ3 720 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 FOPNLQ96NB1 174 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 TMEM74Q96NL1 305 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 CYTH2Q99418 400 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 RBBP8Q99708 897 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 ZMYND15Q9H091 742 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 TFB2MQ9H5Q4 396 aaKnown RBP16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 ACSS3Q9H6R3 686 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 VWA7Q9Y334 891 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 MSRB2Q9Y3D2 182 aa16.89■□□□□ 0.29
SLC3A2-213ENST00000539458 SRRM3A6NNA2 597 aaPredicted RBP16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 TMX2-CTNND1H3BSU7 103 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 KDM1AO60341 852 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 ACSL3O95573 720 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 FAM153BP0C7A2 387 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 MPC1LP0DKB6 136 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 MYBL2P10244 700 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 TYRP1P17643 537 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 CCKBRP32239 447 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 INHBCP55103 352 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 ZFP36L1Q07352 338 aaKnown RBP16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 PRKG2Q13237 762 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 PDAP1Q13442 181 aaKnown RBP16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 EFTUD2Q15029 972 aaKnown RBP eCLIP16.88■□□□□ 0.293e-15■■□□□ 13.8
SLC3A2-213ENST00000539458 KLHL38Q2WGJ6 581 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 FAM153CQ494X1 144 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 GRTP1Q5TC63 336 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 LRRC8EQ6NSJ5 796 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 TMEM71Q6P5X7 295 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 CCNI2Q6ZMN8 369 aaPredicted RBP16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 TRMT10CQ7L0Y3 403 aaKnown RBP16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 B3GNT8Q7Z7M8 397 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 SLITRK4Q8IW52 837 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 DCUN1D3Q8IWE4 304 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 GSPT2Q8IYD1 628 aaKnown RBP16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 CPNE9Q8IYJ1 553 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 CFAP61Q8NHU2 1237 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 LCN9Q8WX39 176 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 RSC1A1Q92681 617 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 OLFM1Q99784 485 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 RAB33BQ9H082 229 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 ENTPD2Q9Y5L3 495 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 NFS1Q9Y697 457 aa16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 MN1Q10571 1320 aaPredicted RBP16.88■□□□□ 0.29
SLC3A2-213ENST00000539458 OR5K3A6NET4 321 aa16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 HOXB3P14651 431 aaPredicted RBP16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 SPRP35270 261 aaPredicted RBP16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 LIMK2P53671 638 aa16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 PMS2P54278 862 aa16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 PAQR3Q6TCH7 311 aa16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 ZNF574Q6ZN55 896 aaPredicted RBP16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 OOSP2Q86WS3 158 aa16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 MARCH9Q86YJ5 346 aa16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 PLXDC1Q8IUK5 500 aa16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 TMEM121BQ9BXQ6 578 aaPredicted RBP16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 TXLNGYQ9BZA5 131 aa16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 SEMA6CQ9H3T2 930 aa16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 SRMSQ9H3Y6 488 aa16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 TMEM9Q9P0T7 183 aa16.87■□□□□ 0.29
SLC3A2-213ENST00000539458 PDP2Q9P2J9 529 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms