RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 FBXO38Q6PIJ6 1188 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 FAM92BQ6ZTR7 304 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 RAB11FIP2Q7L804 512 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 PALM2Q8IXS6 379 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 ZBTB2Q8N680 514 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 CD200R1Q8TD46 325 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 IFT81Q8WYA0 676 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 PMEPA1Q969W9 287 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 ZMYND15Q9H091 742 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 LRRC4CQ9HCJ2 640 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 OCIAD1Q9NX40 245 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 LOXL2Q9Y4K0 774 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 HEBP2Q9Y5Z4 205 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 AK5Q9Y6K8 562 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 COLEC10Q9Y6Z7 277 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 TCRBV9S1A1TA0A576 114 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 F8W8V4 182 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 H3BMM5 538 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 PFDN6O15212 129 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 ZNF500O60304 480 aaPredicted RBP15.31■□□□□ 0.04
RPAIN-206ENST00000539417 C9P02748 559 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 RHOXF2BP0C7M4 288 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 POLR2CP19387 275 aaPredicted RBP15.31■□□□□ 0.04
RPAIN-206ENST00000539417 BDKRB1P46663 353 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 PLEKHS1Q5SXH7 462 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 ZNF449Q6P9G9 518 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 ARHGAP22Q7Z5H3 698 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 OR5K2Q8NHB8 316 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 OLFM1Q99784 485 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 RHOXF2Q9BQY4 288 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 MVB12BQ9H7P6 319 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 POLR1BQ9H9Y6 1135 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 ASCL3Q9NQ33 180 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 FAM114A2Q9NRY5 505 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 HRASLS2Q9NWW9 162 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 VPS9D1Q9Y2B5 631 aa15.31■□□□□ 0.04
RPAIN-206ENST00000539417 TDRKHQ9Y2W6 561 aaKnown RBP15.31■□□□□ 0.04
RPAIN-206ENST00000539417 OR5K3A6NET4 321 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 E5RI56 91 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 BTN3A1O00481 513 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 ZW10O43264 779 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 TLX3O43711 291 aaPredicted RBP15.3■□□□□ 0.04
RPAIN-206ENST00000539417 LSSP48449 732 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 PLOD1Q02809 727 aaPredicted RBP15.3■□□□□ 0.04
RPAIN-206ENST00000539417 EFTUD2Q15029 972 aaKnown RBP eCLIP15.3■□□□□ 0.04
RPAIN-206ENST00000539417 TMED2Q15363 201 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 CLPPQ16740 277 aaPredicted RBP15.3■□□□□ 0.04
RPAIN-206ENST00000539417 KLHL38Q2WGJ6 581 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 GLE1Q53GS7 698 aaKnown RBP15.3■□□□□ 0.04
RPAIN-206ENST00000539417 IRGCQ6NXR0 463 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 KIAA0408Q6ZU52 694 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 C3orf62Q6ZUJ4 267 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 CPNE9Q8IYJ1 553 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 FBXO39Q8N4B4 442 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 WDR36Q8NI36 951 aaKnown RBP15.3■□□□□ 0.04
RPAIN-206ENST00000539417 ZFPM2Q8WW38 1151 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 LCN9Q8WX39 176 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 KCNJ9Q92806 393 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 IL17FQ96PD4 163 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 MCMBPQ9BTE3 642 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 MENTQ9BUN1 341 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 STRADBQ9C0K7 418 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 TRIT1Q9H3H1 467 aaKnown RBP15.3■□□□□ 0.04
RPAIN-206ENST00000539417 EPB41L1Q9H4G0 881 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 TFB2MQ9H5Q4 396 aaKnown RBP15.3■□□□□ 0.04
RPAIN-206ENST00000539417 DHRS7Q9Y394 339 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 ADAMTS20P59510 1910 aa15.3■□□□□ 0.04
RPAIN-206ENST00000539417 ESPNB1AK53 854 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 PLD2O14939 933 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 TNFSF15O95150 251 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 FGF3P11487 239 aaPredicted RBP15.29■□□□□ 0.04
RPAIN-206ENST00000539417 MCM3P25205 808 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 NDUFS1P28331 727 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 SEPHS1P49903 392 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 KPNA2P52292 529 aaKnown RBP15.29■□□□□ 0.04
RPAIN-206ENST00000539417 CYHR1Q6ZMK1 362 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 STRA8Q7Z7C7 330 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 TBC1D21Q8IYX1 336 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 ADGRF3Q8IZF5 1079 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 C2orf73Q8N5S3 287 aaPredicted RBP15.29■□□□□ 0.04
RPAIN-206ENST00000539417 NXPE2Q96DL1 559 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 RNF31Q96EP0 1072 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 SLC46A1Q96NT5 459 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 MAP3K3Q99759 626 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 PHACTR1Q9C0D0 580 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 CCDC68Q9H2F9 335 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 SRMSQ9H3Y6 488 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 CCDC86Q9H6F5 360 aaKnown RBP15.29■□□□□ 0.04
RPAIN-206ENST00000539417 SPHK1Q9NYA1 384 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 NINJ2Q9NZG7 142 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 ZFATQ9P243 1243 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 PISDQ9UG56 409 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 ACACBO00763 2458 aa15.29■□□□□ 0.04
RPAIN-206ENST00000539417 IGHV5-51A0A0C4DH38 117 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 FAM159BA6NKW6 160 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 KPNA5O15131 536 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 FAM155BO75949 473 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 MATN4O95460 622 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 PEBP1P30086 187 aaKnown RBP15.28■□□□□ 0.04
RPAIN-206ENST00000539417 KYNUQ16719 465 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms