RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CASP6P55212 293 aa4.14□□□□□ -1.75
CCDC7-209ENST00000539197 INTS11Q5TA45 600 aaKnown RBP4.14□□□□□ -1.75
CCDC7-209ENST00000539197 LINGO4Q6UY18 593 aa4.14□□□□□ -1.75
CCDC7-209ENST00000539197 ABCA7Q8IZY2 2146 aa4.14□□□□□ -1.75
CCDC7-209ENST00000539197 MTERF3Q96E29 417 aa4.14□□□□□ -1.75
CCDC7-209ENST00000539197 ARSGQ96EG1 525 aa4.14□□□□□ -1.75
CCDC7-209ENST00000539197 FAM81BQ96LP2 452 aa4.14□□□□□ -1.75
CCDC7-209ENST00000539197 HHATLQ9HCP6 504 aa4.14□□□□□ -1.75
CCDC7-209ENST00000539197 SDR39U1Q9NRG7 319 aaPredicted RBP4.14□□□□□ -1.75
CCDC7-209ENST00000539197 PRRC2AP48634 2157 aaKnown RBP4.13□□□□□ -1.75
CCDC7-209ENST00000539197 SRRM5B3KS81 715 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 MAGEC1O60732 1142 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 ITIH1P19827 911 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 PPM1FP49593 454 aaPredicted RBP4.13□□□□□ -1.75
CCDC7-209ENST00000539197 PAX9P55771 341 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 RPS3AP61247 264 aaKnown RBP4.13□□□□□ -1.75
CCDC7-209ENST00000539197 HERV-K104P61576 105 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 PAX8Q06710 450 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 RARS2Q5T160 578 aaKnown RBP4.13□□□□□ -1.75
CCDC7-209ENST00000539197 GRTP1Q5TC63 336 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 GKAP1Q5VSY0 366 aaPredicted RBP4.13□□□□□ -1.75
CCDC7-209ENST00000539197 Q8NBF4 154 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 PPFIBP2Q8ND30 876 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 DACH2Q96NX9 599 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 OR2A14Q96R47 310 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 DNAJC18Q9H819 358 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 SPHK2Q9NRA0 654 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 TUBE1Q9UJT0 475 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 MTMR6Q9Y217 621 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 LYVE1Q9Y5Y7 322 aa4.13□□□□□ -1.75
CCDC7-209ENST00000539197 TO15178 435 aa4.12□□□□□ -1.75
CCDC7-209ENST00000539197 EIF2S1P05198 315 aaKnown RBP4.12□□□□□ -1.75
CCDC7-209ENST00000539197 DUX4L4P0CJ87 422 aa4.12□□□□□ -1.75
CCDC7-209ENST00000539197 CYP2A7P20853 494 aa4.12□□□□□ -1.75
CCDC7-209ENST00000539197 LEPRP48357 1165 aaKnown RBP4.12□□□□□ -1.75
CCDC7-209ENST00000539197 SNRPEP62304 92 aaKnown RBP4.12□□□□□ -1.75
CCDC7-209ENST00000539197 CALCOCO2Q13137 446 aa4.12□□□□□ -1.75
CCDC7-209ENST00000539197 ZNF354CQ86Y25 554 aa4.12□□□□□ -1.75
CCDC7-209ENST00000539197 POM121L12Q8N7R1 296 aa4.12□□□□□ -1.75
CCDC7-209ENST00000539197 VN1R1Q9GZP7 353 aa4.12□□□□□ -1.75
CCDC7-209ENST00000539197 PLK3Q9H4B4 646 aa4.12□□□□□ -1.75
CCDC7-209ENST00000539197 EHD2Q9NZN4 543 aa4.12□□□□□ -1.75
CCDC7-209ENST00000539197 OSGIN1Q9UJX0 560 aa4.12□□□□□ -1.75
CCDC7-209ENST00000539197 PCDHGA5Q9Y5G8 931 aa4.12□□□□□ -1.75
CCDC7-209ENST00000539197 ZNF646O15015 1829 aaPredicted RBP4.11□□□□□ -1.75
CCDC7-209ENST00000539197 C15orf61A6NNL5 157 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 DFFBO76075 338 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 CCR9P51686 369 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 BTN2A1Q7KYR7 527 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 ADGRA1Q86SQ6 560 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 FAM114A1Q8IWE2 563 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 C17orf47Q8NEP4 570 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 OR10G8Q8NGN5 311 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 MIPOL1Q8TD10 442 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 RNF128Q8TEB7 428 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 SMAP2Q8WU79 429 aaPredicted RBP4.11□□□□□ -1.75
CCDC7-209ENST00000539197 ARHGEF2Q92974 986 aaKnown RBP4.11□□□□□ -1.75
CCDC7-209ENST00000539197 GAL3ST4Q96RP7 486 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 FNBP1Q96RU3 617 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 S1PR5Q9H228 398 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 ARRDC1-AS1Q9H2J1 176 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 RHCGQ9UBD6 479 aa4.11□□□□□ -1.75
CCDC7-209ENST00000539197 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.11□□□□□ -1.75
CCDC7-209ENST00000539197 CLEC3BP05452 202 aa4.1□□□□□ -1.75
CCDC7-209ENST00000539197 TRA2BP62995 288 aaKnown RBP4.1□□□□□ -1.75
CCDC7-209ENST00000539197 CX3CL1P78423 397 aa4.1□□□□□ -1.75
CCDC7-209ENST00000539197 CYCSP99999 105 aaKnown RBP4.1□□□□□ -1.75
CCDC7-209ENST00000539197 ASTE1Q2TB18 679 aaPredicted RBP4.1□□□□□ -1.75
CCDC7-209ENST00000539197 SLC25A53Q5H9E4 307 aa4.1□□□□□ -1.75
CCDC7-209ENST00000539197 TBC1D1Q86TI0 1168 aaPredicted RBP4.1□□□□□ -1.75
CCDC7-209ENST00000539197 KIRREL3Q8IZU9 778 aa4.1□□□□□ -1.75
CCDC7-209ENST00000539197 PRICKLE1Q96MT3 831 aaPredicted RBP4.1□□□□□ -1.75
CCDC7-209ENST00000539197 NCAPGQ9BPX3 1015 aa4.1□□□□□ -1.75
CCDC7-209ENST00000539197 PUS3Q9BZE2 481 aaKnown RBP4.1□□□□□ -1.75
CCDC7-209ENST00000539197 CHST11Q9NPF2 352 aa4.1□□□□□ -1.75
CCDC7-209ENST00000539197 UBN1Q9NPG3 1134 aa4.1□□□□□ -1.75
CCDC7-209ENST00000539197 OSER1Q9NX31 292 aa4.1□□□□□ -1.75
CCDC7-209ENST00000539197 PDP2Q9P2J9 529 aa4.1□□□□□ -1.75
CCDC7-209ENST00000539197 GRID1Q9ULK0 1009 aa4.1□□□□□ -1.75
CCDC7-209ENST00000539197 CCNDBP1O95273 360 aa4.09□□□□□ -1.75
CCDC7-209ENST00000539197 SQLEQ14534 574 aa4.09□□□□□ -1.75
CCDC7-209ENST00000539197 DLG2Q15700 870 aa4.09□□□□□ -1.75
CCDC7-209ENST00000539197 TSTQ16762 297 aaKnown RBP4.09□□□□□ -1.75
CCDC7-209ENST00000539197 MOGAT2Q3SYC2 334 aa4.09□□□□□ -1.75
CCDC7-209ENST00000539197 HIGD2BQ4VC39 106 aa4.09□□□□□ -1.75
CCDC7-209ENST00000539197 XKR3Q5GH77 459 aa4.09□□□□□ -1.75
CCDC7-209ENST00000539197 MDH1BQ5I0G3 518 aa4.09□□□□□ -1.75
CCDC7-209ENST00000539197 ARID3BQ8IVW6 561 aaPredicted RBP4.09□□□□□ -1.75
CCDC7-209ENST00000539197 OR13J1Q8NGT2 312 aa4.09□□□□□ -1.75
CCDC7-209ENST00000539197 ZNF486Q96H40 463 aaPredicted RBP4.09□□□□□ -1.75
CCDC7-209ENST00000539197 C16orf70Q9BSU1 422 aa4.09□□□□□ -1.75
CCDC7-209ENST00000539197 MTUS1Q9ULD2 1270 aa4.09□□□□□ -1.75
CCDC7-209ENST00000539197 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.09□□□□□ -1.75
CCDC7-209ENST00000539197 PIAS3Q9Y6X2 628 aa4.09□□□□□ -1.75
CCDC7-209ENST00000539197 MPTX1A8MV57 137 aa4.08□□□□□ -1.76
CCDC7-209ENST00000539197 GAPDHSO14556 408 aaPredicted RBP4.08□□□□□ -1.76
CCDC7-209ENST00000539197 RARGP13631 454 aa4.08□□□□□ -1.76
CCDC7-209ENST00000539197 PRKACGP22612 351 aa4.08□□□□□ -1.76
CCDC7-209ENST00000539197 TMEM50BP56557 158 aa4.08□□□□□ -1.76
CCDC7-209ENST00000539197 LY6DQ14210 128 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms