RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	MAP3K3	Q99759	626 aa		11.96	□□□□□ -0.49
CLTCL1-205	ENST00000538828	KLHL3	Q9UH77	587 aa		11.96	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CDYL	Q9Y232	598 aa		11.96	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ASF1A	Q9Y294	204 aa		11.96	□□□□□ -0.49
CLTCL1-205	ENST00000538828	IGHV5-51	A0A0C4DH38	117 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	OR6C74	A6NCV1	312 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	USP27X	A6NNY8	438 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	C2orf74	A8MZ97	194 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	DNALI1	O14645	258 aa	Predicted RBP	11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	ZNF185	O15231	689 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	EFS	O43281	561 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	MAP3K7	O43318	606 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	KIF1C	O43896	1103 aa	Known RBP	11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	RAD1	O60671	282 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	STK17B	O94768	372 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	PAFAH1B1	P43034	410 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	VPS41	P49754	854 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	TUBB4B	P68371	445 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	TUBB2A	Q13885	445 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	GBX1	Q14549	363 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	MORF4L2	Q15014	288 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	PPP1R7	Q15435	360 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	ANKRD20A4	Q4UJ75	823 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	SYTL3	Q4VX76	610 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	TMTC4	Q5T4D3	741 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	ANKRD22	Q5VYY1	191 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	PTRHD1	Q6GMV3	140 aa	Known RBP	11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	NEPRO	Q6NW34	567 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	DUS1L	Q6P1R4	473 aa	Known RBP	11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	CILP2	Q8IUL8	1156 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	ADGRF3	Q8IZF5	1079 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	CACNA2D3	Q8IZS8	1091 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	OR4E2	Q8NGC2	313 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	LPGAT1	Q92604	370 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	LRRC39	Q96DD0	335 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	SLC45A3	Q96JT2	553 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	SIGLEC10	Q96LC7	697 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	BIRC8	Q96P09	236 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	TUBB2B	Q9BVA1	445 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	RAB11FIP5	Q9BXF6	653 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	RARRES3	Q9UL19	164 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	COMMD10	Q9Y6G5	202 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	FAM169A	Q9Y6X4	670 aa		11.95	□□□□□ -0.5
CLTCL1-205	ENST00000538828	ZCWPW2	A0A1B0GU75	182 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	IVD	P26440	423 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	PRDX3	P30048	256 aa	Known RBP	11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	CCNF	P41002	786 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	PREP	P48147	710 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	SEPHS1	P49903	392 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	KPNA2	P52292	529 aa	Known RBP	11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	MC1R	Q01726	317 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	FOXM1	Q08050	763 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	DHX34	Q14147	1143 aa	Known RBP	11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	KIR2DS3	Q14952	304 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	TGIF1	Q15583	401 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	KYNU	Q16719	465 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	ARHGAP40	Q5TG30	622 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	CASC4	Q6P4E1	433 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	FAM92B	Q6ZTR7	304 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	OTOA	Q7RTW8	1153 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	GALNT7	Q86SF2	657 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	DCUN1D3	Q8IWE4	304 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	IL22RA1	Q8N6P7	574 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	MAGEC3	Q8TD91	643 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	NAT14	Q8WUY8	206 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	TTC9	Q92623	222 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	PMEPA1	Q969W9	287 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	SLC22A18	Q96BI1	424 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	CRELD1	Q96HD1	420 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	LRFN5	Q96NI6	719 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	CATSPER2	Q96P56	530 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	OR6C1	Q96RD1	312 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	DDX47	Q9H0S4	455 aa	Known RBP	11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	CPNE5	Q9HCH3	593 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	APMAP	Q9HDC9	416 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	FGF21	Q9NSA1	209 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	FAM8A1	Q9UBU6	413 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	PYCARD	Q9ULZ3	195 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	RPS6KL1	Q9Y6S9	549 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	ATM	Q13315	3056 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	ATRX	P46100	2492 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	SPTA1	P02549	2419 aa		11.94	□□□□□ -0.5
CLTCL1-205	ENST00000538828	PIPSL	A2A3N6	862 aa		11.93	□□□□□ -0.5
CLTCL1-205	ENST00000538828	EIF3F	O00303	357 aa	Predicted RBP	11.93	□□□□□ -0.5
CLTCL1-205	ENST00000538828	BTN3A1	O00481	513 aa		11.93	□□□□□ -0.5
CLTCL1-205	ENST00000538828	AVIL	O75366	819 aa		11.93	□□□□□ -0.5
CLTCL1-205	ENST00000538828	SPAG6	O75602	509 aa		11.93	□□□□□ -0.5
CLTCL1-205	ENST00000538828	PGAM1	P18669	254 aa		11.93	□□□□□ -0.5
CLTCL1-205	ENST00000538828	POLR2C	P19387	275 aa	Predicted RBP	11.93	□□□□□ -0.5
CLTCL1-205	ENST00000538828	CDH3	P22223	829 aa		11.93	□□□□□ -0.5
CLTCL1-205	ENST00000538828	STAT5A	P42229	794 aa		11.93	□□□□□ -0.5
CLTCL1-205	ENST00000538828	PTGIR	P43119	386 aa		11.93	□□□□□ -0.5
CLTCL1-205	ENST00000538828	ARL4D	P49703	201 aa		11.93	□□□□□ -0.5
CLTCL1-205	ENST00000538828	RAB28	P51157	221 aa		11.93	□□□□□ -0.5
CLTCL1-205	ENST00000538828	HSPA14	Q0VDF9	509 aa		11.93	□□□□□ -0.5
CLTCL1-205	ENST00000538828	ILF2	Q12905	390 aa	Known RBP	11.93	□□□□□ -0.5
CLTCL1-205	ENST00000538828	TUBB3	Q13509	450 aa		11.93	□□□□□ -0.5

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