RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 DCDC1P59894 354 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 PSME3P61289 254 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 RAB30Q15771 203 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 TMEM31Q5JXX7 168 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 SULT1C3Q6IMI6 304 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 CES5AQ6NT32 575 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 CFAP206Q8IYR0 622 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 C2orf73Q8N5S3 287 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-205ENST00000538545 TRMT61BQ9BVS5 477 aaKnown RBP13.8□□□□□ -0.2
ACTN1-205ENST00000538545 LMAN2LQ9H0V9 348 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 CAAP1Q9H8G2 361 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 PARVBQ9HBI1 364 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 SMOXQ9NWM0 555 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 ATXN10Q9UBB4 475 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 POLR3HQ9Y535 204 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-205ENST00000538545 GPR45Q9Y5Y3 372 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 ST14Q9Y5Y6 855 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 CLGNO14967 610 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 LATO43561 262 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 CHEK2O96017 543 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 PCCBP05166 539 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 G6PDP11413 515 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 TAS2R38P59533 333 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 ADAM15Q13444 863 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 GBX1Q14549 363 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 PTGR1Q14914 329 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 SF1Q15637 639 aaKnown RBP13.8□□□□□ -0.2
ACTN1-205ENST00000538545 ZNF423Q2M1K9 1284 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 SYTL3Q4VX76 610 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 PIGGQ5H8A4 983 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 ZNF547Q8IVP9 402 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 MIER2Q8N344 545 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 ABHD8Q96I13 439 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 OSBPL6Q9BZF3 934 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 MKRN2Q9H000 416 aaKnown RBP13.8□□□□□ -0.2
ACTN1-205ENST00000538545 INTS7Q9NVH2 962 aaKnown RBP13.8□□□□□ -0.2
ACTN1-205ENST00000538545 TNPO3Q9Y5L0 923 aaKnown RBP13.8□□□□□ -0.2
ACTN1-205ENST00000538545 CFAP20Q9Y6A4 193 aaKnown RBP13.8□□□□□ -0.2
ACTN1-205ENST00000538545 VPS13AQ96RL7 3174 aa13.8□□□□□ -0.2
ACTN1-205ENST00000538545 NUAK1O60285 661 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 EPB42P16452 691 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 ZFP36L2P47974 494 aaKnown RBP13.79□□□□□ -0.2
ACTN1-205ENST00000538545 RPL38P63173 70 aaKnown RBP13.79□□□□□ -0.2
ACTN1-205ENST00000538545 MRPS22P82650 360 aaKnown RBP13.79□□□□□ -0.2
ACTN1-205ENST00000538545 EIF4HQ15056 248 aaKnown RBP13.79□□□□□ -0.2
ACTN1-205ENST00000538545 AP5B1Q2VPB7 878 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 PAGE3Q5JUK9 113 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 PIP5KL1Q5T9C9 394 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 ZDHHC20Q5W0Z9 365 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 PGAM4Q8N0Y7 254 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 TMIEQ8NEW7 156 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 PPP2R3CQ969Q6 453 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 MED8Q96G25 268 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 C19orf43Q9BQ61 176 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 SLC12A9Q9BXP2 914 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 PIF1Q9H611 641 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 ACTR8Q9H981 624 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 ASPDHA6ND91 283 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 PRORSD1PA6NEY8 169 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 ARNTLO00327 626 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 OTCP00480 354 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 DGKQP52824 942 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 NFE2L1Q14494 772 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 TIGD2Q4W5G0 525 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 C6orf163Q5TEZ5 329 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 C16orf89Q6UX73 402 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 CYP2R1Q6VVX0 501 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 ADGRG6Q86SQ4 1221 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 KBTBD2Q8IY47 623 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 ASZ1Q8WWH4 475 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 TMEM159Q96B96 161 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 CDCA3Q99618 268 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-205ENST00000538545 EBF2Q9HAK2 575 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 SDR39U1Q9NRG7 319 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-205ENST00000538545 ZNF490Q9ULM2 529 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-205ENST00000538545 PSMD13Q9UNM6 376 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 OR1A2Q9Y585 309 aa13.79□□□□□ -0.2
ACTN1-205ENST00000538545 K7EQS6 105 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 LSM1O15116 133 aaKnown RBP13.78□□□□□ -0.2
ACTN1-205ENST00000538545 PAK4O96013 591 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-205ENST00000538545 HIST1H2AGP0C0S8 130 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-205ENST00000538545 PRR35P0CG20 571 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 SLC2A4P14672 509 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 ANPEPP15144 967 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 ZNF8P17098 575 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-205ENST00000538545 HIST1H2ADP20671 130 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 MAT2AP31153 395 aaKnown RBP13.78□□□□□ -0.2
ACTN1-205ENST00000538545 SLC7A2P52569 658 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 ITPRIPL2Q3MIP1 535 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 ATP6AP1LQ52LC2 224 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 IL23RQ5VWK5 629 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 FAM110BQ8TC76 370 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 HIST1H2AHQ96KK5 128 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 HIST1H2AJQ99878 128 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 H2AFJQ9BTM1 129 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 MBNL1Q9NR56 388 aaKnown RBP13.78□□□□□ -0.2
ACTN1-205ENST00000538545 USP22Q9UPT9 525 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 C15orf41Q9Y2V0 281 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 B3GALT4O96024 378 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 CD72P21854 359 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms