RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 TBX1O43435 398 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 CACNG3O60359 315 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 DPM1O60762 260 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 NOS1APO75052 506 aaPredicted RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 PDE9AO76083 593 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 RECQL5O94762 991 aaPredicted RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 SLITRK5O94991 958 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 CLIC3O95833 236 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 RETP07949 1114 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 SERPINF2P08697 491 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 PRR35P0CG20 571 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 MYCLP1P12525 358 aaPredicted RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 CD72P21854 359 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 PSMB4P28070 264 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 PTGS2P35354 604 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 SLC15A1P46059 708 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 CRKP46108 304 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 CLK1P49759 484 aaKnown RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 C1QTNF8P60827 252 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 ELP6Q0PNE2 266 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 SLC13A2Q13183 592 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 KCNAB2Q13303 367 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 NFYCQ13952 458 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 PGM5Q15124 567 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 TBCEQ15813 527 aaPredicted RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 DDR2Q16832 855 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 AAK1Q2M2I8 961 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 KIF19Q2TAC6 998 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 SMU1Q2TAY7 513 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 UGT3A2Q3SY77 523 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 PARP15Q460N3 678 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 TBC1D10BQ4KMP7 808 aaPredicted RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 ARMCX4Q5H9R4 360 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 GLYATQ6IB77 296 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 KIAA0930Q6ICG6 404 aaPredicted RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 SCYL2Q6P3W7 929 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 PKN3Q6P5Z2 889 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 FAM171BQ6P995 826 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 SEZ6L2Q6UXD5 910 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 ZNF517Q6ZMY9 492 aaPredicted RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 GDPGP1Q6ZNW5 385 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 FAM183BPQ6ZVS7 135 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 SPATC1Q76KD6 591 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 CHST15Q7LFX5 561 aaPredicted RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 NECAB2Q7Z6G3 386 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 CCDC190Q86UF4 302 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 KRT73Q86Y46 540 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.58□□□□□ -1.36
USP28-207ENST00000538475 ZNF567Q8N184 647 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 C1orf52Q8N6N3 182 aaKnown RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 NATD1Q8N6N6 113 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 OR10T2Q8NGX3 314 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 NDNFQ8TB73 568 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 ITFG1Q8TB96 612 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 SYTL5Q8TDW5 730 aaPredicted RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 CHTF18Q8WVB6 975 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 DNAJA4Q8WW22 397 aaPredicted RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 SLC7A6Q92536 515 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 KIAA1143Q96AT1 154 aaPredicted RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 ISG20Q96AZ6 181 aaKnown RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 AP2M1Q96CW1 435 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 PDLIM5Q96HC4 596 aaKnown RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 RNF145Q96MT1 663 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 ZNF578Q96N58 590 aaPredicted RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 WDFY2Q96P53 400 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 TSGA13Q96PP4 275 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 MBOAT4Q96T53 435 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 AGAP2Q99490 1192 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 HTATIP2Q9BUP3 242 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 KATNAL1Q9BW62 490 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 GTPBP2Q9BX10 602 aaKnown RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 DGCR6LQ9BY27 220 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 ZNF717Q9BY31 904 aaPredicted RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 HAPLN2Q9GZV7 340 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 KCNN2Q9H2S1 579 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 GSTO2Q9H4Y5 243 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 ASB7Q9H672 318 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 ACOT13Q9NPJ3 140 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 DYRK4Q9NR20 520 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 SETD4Q9NVD3 440 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 SMPD4Q9NXE4 827 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 FBXL12Q9NXK8 326 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 BTG4Q9NY30 223 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 TAS2R9Q9NYW1 312 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 IL37Q9NZH6 218 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 EHD3Q9NZN3 535 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 GABBR1Q9UBS5 961 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 ZMAT5Q9UDW3 170 aaKnown RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 TRMT6Q9UJA5 497 aaKnown RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 CDH9Q9ULB4 789 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 STUB1Q9UNE7 303 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 BTRCQ9Y297 605 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 TMA7Q9Y2S6 64 aaKnown RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 AAR2Q9Y312 384 aaKnown RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 COL11A2P13942 1736 aaPredicted RBP6.58□□□□□ -1.36
USP28-207ENST00000538475 ALPK3Q96L96 1907 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 UBR3Q6ZT12 1888 aa6.58□□□□□ -1.36
USP28-207ENST00000538475 ATP6AP2A0A1C7CYW4 349 aa6.57□□□□□ -1.36
USP28-207ENST00000538475 KLRG2A4D1S0 409 aaPredicted RBP6.57□□□□□ -1.36
USP28-207ENST00000538475 TUBAL3A6NHL2 446 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms