RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 AP1G1O43747 822 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 CDC14BO60729 498 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 USP12O75317 370 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 RHOBTB1O94844 696 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 HEXIM1O94992 359 aaKnown RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 METTL18O95568 372 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 AP2A1O95782 977 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 TRBC1P01850 177 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 PRKCGP05129 697 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 FGF1P05230 155 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 MMP2P08253 660 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 PDHA1P08559 390 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 CELA3BP08861 270 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 ZSCAN5DPP0CG00 497 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 CYP2A6P11509 494 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 TDGF1P13385 188 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 ETS1P14921 441 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 ZNF30P17039 623 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 CTPS1P17812 591 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 NR1D1P20393 614 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 MAT2AP31153 395 aaKnown RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 ACSL1P33121 698 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 RPL22P35268 128 aaKnown RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 NUDT1P36639 197 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 MMP12P39900 470 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 KIR2DL3P43628 341 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 DHPSP49366 369 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 NRG3P56975 720 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 RPS21P63220 83 aaKnown RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 CDK16Q00536 496 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 HGFACQ04756 655 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 CDK18Q07002 472 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 CALCOCO2Q13137 446 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 SEMA5AQ13591 1074 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 CUL1Q13616 776 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 PTK6Q13882 451 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 SPIDRQ14159 915 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 GALNT3Q14435 633 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 ACOX1Q15067 660 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 SLC1A5Q15758 541 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.28□□□□□ -1.722e-6■■■■■ 41.6
SNHG1-208ENST00000538266 SETMARQ53H47 684 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 TOR2AQ5JU69 321 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 SIRPB2Q5JXA9 342 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 SPDYCQ5MJ68 293 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 WDR45BQ5MNZ6 344 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 LYSMD4Q5XG99 296 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 DENND2CQ68D51 928 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 KIAA0895LQ68EN5 471 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 KIAA1161Q6NSJ0 714 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 NEK5Q6P3R8 708 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 DPPA4Q7L190 304 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 PCGF5Q86SE9 256 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 CLEC14AQ86T13 490 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 PRUNE1Q86TP1 453 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 TRIM69Q86WT6 500 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 SLC41A1Q8IVJ1 513 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 SLC25A41Q8N5S1 370 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 DEFB119Q8N690 84 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 OTUD6BQ8N6M0 293 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 ANKRD53Q8N9V6 530 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 GLIS1Q8NBF1 620 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 ZBTB44Q8NCP5 570 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 BBOF1Q8ND07 529 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 CADM4Q8NFZ8 388 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 BLOC1S5Q8TDH9 187 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 ATOH1Q92858 354 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 TADA1Q96BN2 335 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 SLC7A6OSQ96CW6 309 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 OXNAD1Q96HP4 312 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 CABS1Q96KC9 395 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 DPYSL5Q9BPU6 564 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 TBL1YQ9BQ87 522 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 APOL2Q9BQE5 337 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 LRRC1Q9BTT6 524 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 WRAP53Q9BUR4 548 aaKnown RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 BDH2Q9BUT1 245 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 MLPHQ9BV36 600 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 GPR63Q9BZJ6 419 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 SLC6A15Q9H2J7 730 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 ACTR5Q9H9F9 607 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 CD93Q9NPY3 652 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 GDF3Q9NR23 364 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 EIF2B3Q9NR50 452 aaKnown RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 DNAJC28Q9NX36 388 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 WSB2Q9NYS7 404 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 HACD3Q9P035 362 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 ITM2BQ9Y287 266 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 PKP3Q9Y446 797 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 FADS3Q9Y5Q0 445 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 R4GN57 208 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 PLXND1Q9Y4D7 1925 aa4.27□□□□□ -1.73
SNHG1-208ENST00000538266 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.27□□□□□ -1.73
SNHG1-208ENST00000538266 LOC285095A0A1B0GVY8 99 aa4.27□□□□□ -1.73
SNHG1-208ENST00000538266 IGLON5A6NGN9 336 aa4.27□□□□□ -1.73
SNHG1-208ENST00000538266 NPIPB15A6NHN6 443 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-208ENST00000538266 C2orf81A6NN90 581 aa4.27□□□□□ -1.73
SNHG1-208ENST00000538266 ANKRD65E5RJM6 399 aa4.27□□□□□ -1.73
SNHG1-208ENST00000538266 GOLGA8MH3BSY2 632 aa4.27□□□□□ -1.73
SNHG1-208ENST00000538266 PSMD11O00231 422 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms