RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 LRRC73Q5JTD7 316 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 HABP4Q5JVS0 413 aaKnown RBP11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 INTS11Q5TA45 600 aaKnown RBP11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 UBE2R2Q712K3 238 aaPredicted RBP11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 IFNEQ86WN2 208 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 PROSER1Q86XN7 944 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 CHERPQ8IWX8 916 aaKnown RBP11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 RGL4Q8IZJ4 473 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 GLB1L3Q8NCI6 653 aaPredicted RBP11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 SPPL3Q8TCT6 385 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 RAD9AQ99638 391 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 CGREF1Q99674 301 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 SPATA16Q9BXB7 569 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 FAM83DQ9H4H8 585 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 LRTM1Q9HBL6 345 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 FARSBQ9NSD9 589 aaKnown RBP11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 CXXC1Q9P0U4 656 aaPredicted RBP11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 ZNF490Q9ULM2 529 aaPredicted RBP11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 AK5Q9Y6K8 562 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 PRRC2BQ5JSZ5 2229 aaKnown RBP11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 GFYI3L273 518 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 KPNA5O15131 536 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 INPP4BO15327 924 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 SLC16A5O15375 505 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 FAM58BPP0C7Q3 252 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 MTHFD1P11586 935 aaKnown RBP11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 CKMT2P17540 419 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 PSMC3P17980 439 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 FASP25445 335 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 OXTRP30559 389 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 DGKQP52824 942 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 HMGCS1Q01581 520 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 HSPA14Q0VDF9 509 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 CYP51A1Q16850 503 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 PRSS36Q5K4E3 855 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 LRRC70Q7Z2Q7 622 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 HSD11B1LQ7Z5J1 315 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 NECAB2Q7Z6G3 386 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 RASGRP3Q8IV61 690 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 POF1BQ8WVV4 589 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 MYLIPQ8WY64 445 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 CENPNQ96H22 339 aaPredicted RBP11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 TSC22D3Q99576 134 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 ZBTB18Q99592 522 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 NFKBIL1Q9UBC1 381 aaPredicted RBP11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 CD84Q9UIB8 345 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 PCDHB3Q9Y5E6 796 aa11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 KIAA0100Q14667 2235 aaKnown RBP11.17□□□□□ -0.62
SLC28A1-204ENST00000538177 SGTAO43765 313 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 LEFTY1O75610 366 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 AP2A2O94973 939 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 KRT6AP02538 564 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 KRT6BP04259 564 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 HNRNPA1P09651 372 aaKnown RBP eCLIP11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 FCGR1AP12314 374 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 TIMP2P16035 220 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 HRH2P25021 359 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 CTNNB1P35222 781 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 SLC6A12P48065 614 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 KRT6CP48668 564 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 HNMTP50135 292 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 VASPP50552 380 aaPredicted RBP11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 SP140Q13342 867 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 AAK1Q2M2I8 961 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 GGTA1PQ4G0N0 100 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 CACHD1Q5VU97 1274 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 NEK10Q6ZWH5 1172 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 DET1Q7L5Y6 550 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 CARM1Q86X55 608 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 VRK3Q8IV63 474 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 MFSD2AQ8NA29 543 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 OR8J3Q8NGG0 315 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 NUDT8Q8WV74 236 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 SCAMP4Q969E2 229 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 ZSWIM3Q96MP5 696 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 NOTCH4Q99466 2003 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 EPB41L1Q9H4G0 881 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 ACTR8Q9H981 624 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 PCDH12Q9NPG4 1184 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 C1orf109Q9NX04 203 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 DUS2Q9NX74 493 aaKnown RBP11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 ANAPC2Q9UJX6 822 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 FBXO10Q9UK96 956 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 NEUROG3Q9Y4Z2 214 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 WNT6Q9Y6F9 365 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 KCNE1BA0A087WTH5 132 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 TTC34A8MYJ7 566 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 UPK3BL1B0FP48 263 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 CFAP99D6REC4 459 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 UPK3BL2E5RIL1 263 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 SOCS2O14508 198 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 SEC22BO75396 215 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 HIST1H2AGP0C0S8 130 aaPredicted RBP11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 NCK1P16333 377 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 HIST1H2ADP20671 130 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 AKT1P31749 480 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 OR4D2P58180 307 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 NTHL1P78549 312 aa11.16□□□□□ -0.62
SLC28A1-204ENST00000538177 PPIGQ13427 754 aaKnown RBP eCLIP11.16□□□□□ -0.629e-7■■■■■ 27.7
SLC28A1-204ENST00000538177 PTGR1Q14914 329 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms