RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 EIF2DP41214 584 aaKnown RBP7.07□□□□□ -1.28
MSH6-209ENST00000538136 PTGIRP43119 386 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 GFERP55789 205 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 NRG1Q02297 640 aaPredicted RBP7.07□□□□□ -1.28
MSH6-209ENST00000538136 CAPRIN1Q14444 709 aaKnown RBP7.07□□□□□ -1.28
MSH6-209ENST00000538136 STPG1Q5TH74 334 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 CWF19L1Q69YN2 538 aaKnown RBP7.07□□□□□ -1.28
MSH6-209ENST00000538136 CLEC6AQ6EIG7 209 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 KLHL35Q6PF15 583 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 IL27RAQ6UWB1 636 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 BEND5Q7L4P6 421 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 CLNKQ7Z7G1 428 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 GAB3Q8WWW8 586 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 ALG14Q96F25 216 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 CNDP1Q96KN2 507 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 ZNF395Q9H8N7 513 aaPredicted RBP7.07□□□□□ -1.28
MSH6-209ENST00000538136 SOX13Q9UN79 622 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 DOPEY2Q9Y3R5 2298 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 IGLV3-10A0A075B6K4 115 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 TEX51A0A1B0GUA7 166 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 ARHGAP33O14559 1287 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 GLRA3O75311 464 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 LYPLA1O75608 230 aaPredicted RBP7.07□□□□□ -1.28
MSH6-209ENST00000538136 C8orf89P0DMQ9 161 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 ZNF30P17039 623 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 EEF1DP29692 281 aaKnown RBP7.07□□□□□ -1.28
MSH6-209ENST00000538136 OR1D4P47884 311 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 CDK16Q00536 496 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 FGL2Q14314 439 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 PGS1Q32NB8 556 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 KIAA1161Q6NSJ0 714 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 POMZP3Q6PJE2 187 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 ASCL5Q7RTU5 278 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 OR4N5Q8IXE1 308 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 RNF175Q8N4F7 328 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 AFAP1L2Q8N4X5 818 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 TBC1D19Q8N5T2 526 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 OTUB1Q96FW1 271 aaPredicted RBP7.07□□□□□ -1.28
MSH6-209ENST00000538136 LRIG1Q96JA1 1093 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 NUDT22Q9BRQ3 303 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 CCM2Q9BSQ5 444 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 CNPPD1Q9BV87 410 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 NMRAL1Q9HBL8 299 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 MAGEE1Q9HCI5 957 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 EFR3BQ9Y2G0 817 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 CCDC151A5D8V7 595 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 BTNL10A8MVZ5 291 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 SPINT1O43278 529 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 GREM1O60565 184 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 SLC16A8O95907 504 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 PROS1P07225 676 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 CPA3P15088 417 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 PFKLP17858 780 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 SSR2P43308 183 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 CPA2P48052 419 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 TAS2R38P59533 333 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 IL1RL1Q01638 556 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 CHIT1Q13231 466 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 DEFB134Q4QY38 66 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 VRK3Q8IV63 474 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 NAT8LQ8N9F0 302 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 TMIEQ8NEW7 156 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 TSSK3Q96PN8 268 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 DPH7Q9BTV6 452 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 EBPLQ9BY08 206 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 NUF2Q9BZD4 464 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 OR51B5Q9H339 312 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 EBF2Q9HAK2 575 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 NPHS2Q9NP85 383 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 KCTD5Q9NXV2 234 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 CPNE7Q9UBL6 633 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 DGKBQ9Y6T7 804 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 A0A0G2JMZ2 1700 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 GFRA2O00451 464 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 CTIFO43310 598 aaKnown RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 KDM1AO60341 852 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 SEC22BO75396 215 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 RPN2P04844 631 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 TCN1P20061 433 aaPredicted RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 SERPINB8P50452 374 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 COPAP53621 1224 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 RAB10P61026 200 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 CHAF1BQ13112 559 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 NFATC4Q14934 902 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 TGIF1Q15583 401 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 TRIP6Q15654 476 aaKnown RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 MANEALQ5VSG8 457 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 C19orf48Q6RUI8 117 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 KDELC1Q6UW63 502 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 C4orf22Q6V702 233 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 ZNF783Q6ZMS7 281 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 LKAAEAR1Q8TD35 194 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 HEXDCQ8WVB3 486 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 MMABQ96EY8 250 aaPredicted RBP7.06□□□□□ -1.28
MSH6-209ENST00000538136 SIGLEC10Q96LC7 697 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 BMFQ96LC9 184 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 NSMCE3Q96MG7 304 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 OLFM3Q96PB7 478 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 MAP3K3Q99759 626 aa7.06□□□□□ -1.28
MSH6-209ENST00000538136 MARK1Q9P0L2 795 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms