RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CTSEP14091 401 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 BGNP21810 368 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 IDSP22304 550 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 MDH1P40925 334 aaKnown RBP15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 AGTR2P50052 363 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 IL9RQ01113 521 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 ILF3Q12906 894 aaKnown RBP eCLIP15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 SHBQ15464 509 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 PFKFB4Q16877 469 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 ZXDCQ2QGD7 858 aaPredicted RBP15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 FRA10AC1Q70Z53 315 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 OR2I1PQ8NGU4 316 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 LMX1AQ8TE12 382 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 TFGQ92734 400 aaPredicted RBP15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 ESAMQ96AP7 390 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 C12orf66Q96MD2 445 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 SLC12A9Q9BXP2 914 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 IMP3Q9NV31 184 aaKnown RBP15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 TAAR2Q9P1P5 351 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 ACSL5Q9ULC5 683 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 PLAGL1Q9UM63 463 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 OARD1Q9Y530 152 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 KLHL33A6NCF5 533 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 FFAR2O15552 330 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 SIX3O95343 332 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 C8GP07360 202 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 FGF3P11487 239 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 CCR10P46092 362 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 PLOD1Q02809 727 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 PRKG2Q13237 762 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 RPE65Q16518 533 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 ATG14Q6ZNE5 492 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 TAF8Q7Z7C8 310 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 PTGR2Q8N8N7 351 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 PRSS33Q8NF86 280 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 RDH11Q8TC12 318 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 DYDC1Q8WWB3 177 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 TMEM237Q96Q45 408 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 ZNF395Q9H8N7 513 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 IL21RQ9HBE5 538 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 PARVBQ9HBI1 364 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 NCKIPSDQ9NZQ3 722 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 CD274Q9NZQ7 290 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 ASF1AQ9Y294 204 aa15.26■□□□□ 0.03
SFSWAP-206ENST00000537582 TP53BP1Q12888 1972 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 PRR5-ARHGAP8B1AHC4 643 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 KCNJ13O60928 360 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 TPBGLP0DKB5 382 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 GFAPP14136 432 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 ATP5F1P24539 256 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 RPIAP49247 311 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 BLKP51451 505 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 TCF15Q12870 199 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 BNIP3Q12983 259 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 GRIK2Q13002 908 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 CHI3L2Q15782 390 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 UAP1L1Q3KQV9 507 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 FAM219BQ5XKK7 198 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 NUDCD3Q8IVD9 361 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 FBXO39Q8N4B4 442 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 ZNF548Q8NEK5 533 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 CKAP2Q8WWK9 683 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 JPH3Q8WXH2 748 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 PKP4Q99569 1192 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 HGH1Q9BTY7 390 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 GSDMCQ9BYG8 508 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 OXSMQ9NWU1 459 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 SIRPGQ9P1W8 387 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 ZNF624Q9P2J8 865 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 SUSD2Q9UGT4 822 aa15.25■□□□□ 0.03
SFSWAP-206ENST00000537582 IFRD1O00458 451 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 SLC16A5O15375 505 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 TAPBPO15533 448 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 PIAS2O75928 621 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 CATP04040 527 aaKnown RBP15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 ARRB2P32121 409 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 SP140Q13342 867 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 GRB7Q14451 532 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 TCEAL6Q6IPX3 200 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 ABRAXAS1Q6UWZ7 409 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 TCEAL3Q969E4 200 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 SKA1Q96BD8 255 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 FOPNLQ96NB1 174 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 IL17FQ96PD4 163 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 EGFL8Q99944 293 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 TMEM79Q9BSE2 394 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 ARRDC1-AS1Q9H2J1 176 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 ARL15Q9NXU5 204 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 NUDT4Q9NZJ9 180 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 TDRKHQ9Y2W6 561 aaKnown RBP15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 TMEM131Q92545 1883 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 SYCE1LA8MT33 242 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 B4DGG1 531 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 YY2O15391 372 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 BIRC5O15392 142 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 AQP9O43315 295 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 KLK8O60259 260 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 SMIM24O75264 130 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 IPO13O94829 963 aaKnown RBP15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 MTHFD1P11586 935 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms